Fitness for 5 genes in Sinorhizobium meliloti 1021

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500 ntSMc01488 and SMc01406 are separated by 111 nucleotidesSMc01406 and SMc01407 are separated by 186 nucleotidesSMc01407 and SMc01408 are separated by 194 nucleotidesSMc01408 and SMc01409 are separated by 230 nucleotides SMc01488: SMc01488 - hypothetical protein, at 2,247,640 to 2,248,137 SMc01488 SMc01406: SMc01406 - transcriptional regulator, at 2,248,249 to 2,249,667 SMc01406 SMc01407: SMc01407 - pyridoxine 5'-phosphate synthase, at 2,249,854 to 2,250,606 SMc01407 SMc01408: SMc01408 - hypothetical protein, at 2,250,801 to 2,251,511 SMc01408 SMc01409: SMc01409 - hypothetical protein, at 2,251,742 to 2,252,848 SMc01409
Group Condition SMc01488 SMc01406 SMc01407 SMc01408 SMc01409
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -1.8 -0.3 N.D. +0.0 +0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.9 -0.4 N.D. -0.2 +0.2
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.8 +0.2 N.D. -0.1 -0.2
volatiles R2A-HEPES with volatiles from Trichoderma atroviridae IMI -0.6 -0.1 N.D. -0.0 -0.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.4 -0.2 N.D. -0.3 +0.3
nutrient L-Lysine -0.5 -0.1 N.D. -0.0 +0.2
r2a-hepes control R2A-HEPES control for volatile experiments +0.2 -0.2 N.D. -0.0 -0.3
nitrogen source L-Arginine (N) -0.0 +0.2 N.D. +0.4 -0.8
stress Chlorite 0.1 mM -0.3 -0.3 N.D. -0.3 +0.7
pH LB, pH8 -0.1 -0.5 N.D. +0.2 +0.2
nitrogen source L-Glutamine (N) -0.0 -0.4 N.D. +0.1 +0.2
nutrient L-Histidine -0.1 -0.2 N.D. -0.1 +0.4
nitrogen source nitrate (N) -0.3 -0.1 N.D. +0.2 +0.2
pH LB, pH7 +0.1 -0.2 N.D. +0.1 +0.5
stress Chloride 200 mM +0.3 -0.4 N.D. +0.2 +0.4
stress Nickel (II) chloride 0.5 mM +0.2 -0.2 N.D. +0.0 +0.4
stress Aluminum chloride +0.1 -0.1 N.D. +0.1 +0.5
lb LB +0.3 -0.2 N.D. +0.1 +0.5
carbon source D-Ribose (C) +0.4 +0.1 N.D. -0.0 +0.3
carbon source D,L-Lactate (C) +0.1 +0.2 N.D. +0.2 +0.2
stress Thallium(I) acetate 0.0025 mg/ml +0.5 -0.1 N.D. +0.3 +0.1
stress nitrate 40 mM -0.0 +0.2 N.D. +0.1 +0.6
stress Cisplatin 0.0005 mg/ml +0.3 +0.1 N.D. +0.0 +0.4
carbon source D-Glucosamine Hydrochloride (C) +0.1 +0.3 N.D. +0.2 +0.3
stress Nickel (II) chloride 1 mM +0.0 -0.2 N.D. +0.3 +0.7
stress Paraquat dichloride 0.3 mg/ml +0.4 +0.2 N.D. +0.1 +0.2
stress Paraquat dichloride 0.2 mg/ml +0.3 +0.1 N.D. +0.3 +0.4
carbon source NAG (C) +0.4 +0.2 N.D. +0.2 +0.4
stress Cisplatin 0.001 mg/ml +0.3 +0.2 N.D. +0.2 +0.6
stress perchlorate 10 mM +0.6 +0.3 N.D. +0.1 +0.7
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