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Protein
Homologs
Fitness for 5 genes in
Sinorhizobium meliloti 1021
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
SMc01934 and SMc01935 are separated by 104 nucleotides
SMc01935 and SMc01376 are separated by 17 nucleotides
SMc01376 and SMc01375 are separated by 468 nucleotides
SMc01375 and SMc01374 are separated by 279 nucleotides
SMc01934: SMc01934 - prolyl-tRNA synthetase, at 1,398,815 to 1,400,143
SMc01934
SMc01935: SMc01935 - hypothetical protein, at 1,400,248 to 1,401,474
SMc01935
SMc01376: SMc01376 - ABC transporter ATP-binding protein, at 1,401,492 to 1,402,178
SMc01376
SMc01375: SMc01375 - DNA polymerase III subunit alpha, at 1,402,647 to 1,406,156
SMc01375
SMc01374: SMc01374 - hypothetical protein, at 1,406,436 to 1,407,662
SMc01374
Group
Condition
SMc01934
SMc01935
SMc01376
SMc01375
SMc01374
stress
Sisomicin 0.004 mg/ml
N.D.
N.D.
N.D.
N.D.
-0.9
stress
Cobalt chloride 0.16 mM
N.D.
N.D.
N.D.
N.D.
-0.8
r2a-hepes control
R2A-HEPES control for volatile experiments
N.D.
N.D.
N.D.
N.D.
-0.7
pH
LB, pH6
N.D.
N.D.
N.D.
N.D.
-0.7
stress
Aluminum chloride
N.D.
N.D.
N.D.
N.D.
-0.7
stress
Nickel (II) chloride 0.5 mM
N.D.
N.D.
N.D.
N.D.
-0.6
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
N.D.
N.D.
N.D.
N.D.
-0.6
stress
Nickel (II) chloride 1 mM
N.D.
N.D.
N.D.
N.D.
-0.6
r2a-hepes control
R2A-HEPES control for volatile experiments
N.D.
N.D.
N.D.
N.D.
-0.5
r2a-hepes control
R2A-HEPES control for volatile experiments
N.D.
N.D.
N.D.
N.D.
-0.5
carbon source
L-Leucine (C)
N.D.
N.D.
N.D.
N.D.
-0.5
stress
Cisplatin 0.0005 mg/ml
N.D.
N.D.
N.D.
N.D.
-0.5
agar plate interaction control
Parafilmed volatile agar plate with no fungus
N.D.
N.D.
N.D.
N.D.
-0.5
volatiles
R2A-HEPES with volatiles from Trichoderma atroviridae IMI
N.D.
N.D.
N.D.
N.D.
-0.5
stress
Paraquat dichloride 0.2 mg/ml
N.D.
N.D.
N.D.
N.D.
-0.5
r2a-hepes control
R2A-HEPES control for volatile experiments
N.D.
N.D.
N.D.
N.D.
-0.5
nitrogen source
L-Serine (N)
N.D.
N.D.
N.D.
N.D.
-0.5
nitrogen source
L-Arginine (N)
N.D.
N.D.
N.D.
N.D.
-0.5
carbon source
m-Inositol (C)
N.D.
N.D.
N.D.
N.D.
-0.5
volatiles
R2A-HEPES with volatiles from Trichoderma atroviridae IMI
N.D.
N.D.
N.D.
N.D.
-0.4
carbon source
succinate (C)
N.D.
N.D.
N.D.
N.D.
-0.4
stress
copper (II) chloride 1 mM
N.D.
N.D.
N.D.
N.D.
-0.4
carbon source
D-Mannose (C)
N.D.
N.D.
N.D.
N.D.
-0.4
r2a control
R2A control
N.D.
N.D.
N.D.
N.D.
-0.4
carbon source
D-Galactose (C)
N.D.
N.D.
N.D.
N.D.
-0.4
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
N.D.
N.D.
N.D.
N.D.
-0.4
carbon source
L-Proline (C)
N.D.
N.D.
N.D.
N.D.
-0.4
stress
Thallium(I) acetate 0.0025 mg/ml
N.D.
N.D.
N.D.
N.D.
-0.4
stress
3-octanone 0.456 mM
N.D.
N.D.
N.D.
N.D.
+0.4
stress
6-Pentyl-2H-pyran-2-one 0.4177863333 mM
N.D.
N.D.
N.D.
N.D.
+0.5
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