Fitness for 5 genes in Sinorhizobium meliloti 1021

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500 ntSMc01224 and SMc01223 are separated by 433 nucleotidesSMc01223 and SMc01222 are separated by 121 nucleotidesSMc01222 and SMc01221 are separated by 18 nucleotidesSMc01221 and SMc01220 overlap by 4 nucleotides SMc01224: SMc01224 - thioredoxin reductase, at 1,700,159 to 1,701,133 SMc01224 SMc01223: SMc01223 - transcriptional regulator, at 1,701,567 to 1,702,037 SMc01223 SMc01222: SMc01222 - lipopolysaccharide core biosynthesis glycosyl transferase, at 1,702,159 to 1,702,971 SMc01222 SMc01221: SMc01221 - lipopolysaccharide core biosynthesis glycosyl transferase, at 1,702,990 to 1,704,021 SMc01221 SMc01220: SMc01220 - lipopolysaccharide core biosynthesis glycosyl transferase, at 1,704,018 to 1,705,040 SMc01220
Group Condition SMc01224 SMc01223 SMc01222 SMc01221 SMc01220
stress Fusidic 0.0001 mg/ml N.D. -0.9 -1.8 -4.4 -6.9
stress Aluminum chloride N.D. -0.1 -3.3 -2.5 -4.2
stress A22 0.02 mg/ml N.D. -0.4 -2.9 -1.7 -5.1
stress Polymyxin B sulfate 0.00005 mg/ml N.D. +0.5 -0.2 -4.3 -5.7
stress Sisomicin 0.004 mg/ml N.D. +0.1 -0.1 -1.7 -3.2
pH LB, pH8 N.D. +2.1 +0.8 -2.4 -5.3
carbon source Myristic (C) N.D. +0.3 -0.6 -0.7 -3.3
r2a-hepes control R2A-HEPES control for volatile experiments N.D. -1.8 -2.8 +0.1 +0.4
carbon source acetate (C) N.D. +0.5 -0.7 -0.8 -3.0
r2a-hepes control R2A-HEPES control for volatile experiments N.D. -1.3 -3.1 +0.2 +0.9
r2a-hepes control R2A-HEPES control for volatile experiments N.D. -1.0 -3.1 +0.2 +0.7
pH LB, pH8 N.D. +2.3 +1.0 -2.3 -3.4
agar plate interaction control Parafilmed volatile agar plate with no fungus N.D. +0.6 +2.0 -0.2 -4.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI N.D. +1.3 +2.6 -0.6 -5.0
stress Chlorite 0.1 mM N.D. +1.4 +1.3 -1.6 -2.6
agar plate interaction control Parafilmed volatile agar plate with no fungus N.D. +1.2 +2.5 +0.0 -5.2
agar plate interaction control Parafilmed volatile agar plate with no fungus N.D. +1.7 +1.8 -0.7 -3.8
agar plate interaction control Parafilmed volatile agar plate with no fungus N.D. +1.3 +2.3 -0.6 -3.6
agar plate interaction control Parafilmed volatile agar plate with no fungus N.D. +1.4 +2.1 -0.1 -3.9
agar plate interaction control Parafilmed volatile agar plate with no fungus N.D. +0.9 +2.1 -0.2 -3.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI N.D. +1.3 +2.3 -0.5 -2.5
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI N.D. +1.5 +2.8 -0.4 -2.5
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI N.D. +1.6 +2.6 -0.6 -1.4
stress D-Cycloserine 0.05 mg/ml N.D. +2.0 +2.1 +0.3 -1.4
lb LB N.D. +2.6 +2.2 +0.3 -1.1
lb LB N.D. +2.4 +2.4 +0.2 -0.8
stress copper (II) chloride 1 mM N.D. +1.4 +1.8 +0.9 +1.1
pH LB, pH6 N.D. +1.1 +1.9 +2.3 +2.7
pH LB, pH6 N.D. +1.4 +1.8 +2.6 +2.5
stress perchlorate 10 mM N.D. +3.7 +4.2 +1.1 +0.3
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