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Cofit
Protein
Homologs
Fitness for 5 genes in
Sinorhizobium meliloti 1021
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
SMc01218 and SMc01217 are separated by 292 nucleotides
SMc01217 and SMc01216 are separated by 3 nucleotides
SMc01216 and SMc01215 are separated by 128 nucleotides
SMc01215 and SMc01214 are separated by 202 nucleotides
SMc01218: SMc01218 - transcription elongation factor GreA, at 1,706,186 to 1,706,662
SMc01218
SMc01217: SMc01217 - transport transmembrane protein, at 1,706,955 to 1,708,424
SMc01217
SMc01216: SMc01216 - hypothetical protein, at 1,708,428 to 1,708,730
SMc01216
SMc01215: SMc01215 - carbamoyl phosphate synthase large subunit, at 1,708,859 to 1,712,350
SMc01215
SMc01214: SMc01214 - zinc-containing alcohol dehydrogenase, at 1,712,553 to 1,713,596
SMc01214
Group
Condition
SMc01218
SMc01217
SMc01216
SMc01215
SMc01214
stress
Paraquat dichloride 0.3 mg/ml
N.D.
-4.6
-0.5
-2.4
-0.2
carbon source
D-Fructose (C)
N.D.
+0.0
-1.3
-4.8
-0.1
carbon source
L-Glutamine (C)
N.D.
-0.1
-0.4
-4.9
-0.7
carbon source
pyruvate (C)
N.D.
+0.0
-0.7
-5.0
-0.5
carbon source
D-Xylose (C)
N.D.
-0.1
-0.9
-4.8
-0.2
nitrogen source
L-Histidine (N)
N.D.
-0.0
-0.6
-3.9
-1.3
carbon source
D-Maltose (C)
N.D.
-0.1
-0.4
-5.0
-0.3
carbon source
L-Fucose (C)
N.D.
-0.1
-0.2
-5.3
-0.2
carbon source
L-Malic (C)
N.D.
-0.2
-0.2
-5.0
-0.3
carbon source
Glycerol (C)
N.D.
-0.2
-0.5
-5.1
+0.1
carbon source
D-Tagatose (C)
N.D.
+0.0
-0.0
-5.2
-0.4
carbon source
m-Inositol (C)
N.D.
+0.1
-0.5
-5.1
-0.1
carbon source
D-Raffinose (C)
N.D.
+0.0
-0.4
-5.0
-0.2
carbon source
D-Cellobiose (C)
N.D.
-0.0
-0.3
-5.1
-0.1
carbon source
NAG (C)
N.D.
+0.1
-0.6
-4.9
-0.0
carbon source
D-Galactose (C)
N.D.
+0.1
-0.4
-5.0
-0.1
carbon source
D-Salicin (C)
N.D.
-0.1
-0.5
-4.8
-0.0
carbon source
Beta-Lactose (C)
N.D.
+0.0
-0.2
-4.9
-0.2
carbon source
D-Sorbitol (C)
N.D.
+0.0
-0.2
-5.1
+0.0
carbon source
D,L-Lactate (C)
N.D.
+0.1
-0.0
-4.9
-0.3
carbon source
Uridine (C)
N.D.
+0.1
-0.3
-5.0
+0.1
carbon source
L-Arabinose (C)
N.D.
+0.1
-0.2
-4.8
-0.2
stress
Paraquat dichloride 0.2 mg/ml
N.D.
-4.0
+0.1
-1.1
+0.3
carbon source
D-Arabinose (C)
N.D.
+0.0
+0.6
-4.8
-0.4
nitrogen source
NAG (N)
N.D.
+0.1
-0.9
-4.3
+0.5
nitrogen source
L-Leucine (N)
N.D.
+0.2
-0.8
-3.9
+0.7
stress
Paraquat dichloride 0.05 mg/ml
N.D.
-2.1
-0.2
+3.4
-0.4
stress
perchlorate 10 mM
N.D.
+0.2
-1.1
+4.7
-0.4
lb
LB
N.D.
+0.0
-0.6
+4.5
-0.2
stress
Paraquat dichloride 0.2 mg/ml
N.D.
-0.0
-0.7
+4.7
-0.3
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