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Cofit
Protein
Homologs
Fitness for 5 genes in
Sinorhizobium meliloti 1021
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
SMc01194 and SMc01193 are separated by 1 nucleotides
SMc01193 and SMc01192 are separated by 14 nucleotides
SMc01192 and SMc01191 are separated by 229 nucleotides
SMc01191 and SMc01190 are separated by 90 nucleotides
SMc01194: SMc01194 - hypothetical protein, at 1,735,940 to 1,736,776
SMc01194
SMc01193: SMc01193 - hypothetical protein, at 1,736,778 to 1,737,557
SMc01193
SMc01192: SMc01192 - methionyl-tRNA synthetase, at 1,737,572 to 1,739,122
SMc01192
SMc01191: SMc01191 - hypothetical protein, at 1,739,352 to 1,739,663
SMc01191
SMc01190: SMc01190 - DNA polymerase III subunit delta', at 1,739,754 to 1,740,785
SMc01190
Group
Condition
SMc01194
SMc01193
SMc01192
SMc01191
SMc01190
stress
3-octanone 2.655166667 mM
-0.2
-0.6
N.D.
-0.4
N.D.
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-0.2
+0.5
N.D.
-0.4
N.D.
nitrogen source
nitrate (N)
-0.4
+0.4
N.D.
+0.1
N.D.
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.3
+0.6
N.D.
-0.1
N.D.
stress
Paraquat dichloride 0.2 mg/ml
+0.3
+0.4
N.D.
-0.3
N.D.
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.3
+0.6
N.D.
-0.0
N.D.
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.0
+0.7
N.D.
-0.3
N.D.
stress
Polymyxin B sulfate 0.00005 mg/ml
-0.1
+1.2
N.D.
-0.4
N.D.
stress
Paraquat dichloride 0.05 mg/ml
-0.1
+1.1
N.D.
-0.2
N.D.
stress
Thallium(I) acetate 0.0025 mg/ml
-0.1
+0.8
N.D.
+0.1
N.D.
stress
Aluminum chloride
+0.4
+0.7
N.D.
-0.1
N.D.
nutrient
Min media with glucose
+0.2
+0.7
N.D.
+0.1
N.D.
carbon source
L-Lysine (C)
+0.1
+0.2
N.D.
+0.6
N.D.
stress
Thallium(I) acetate 0.001 mg/ml
+0.4
+0.6
N.D.
+0.0
N.D.
nitrogen source
L-Histidine (N)
+0.1
+0.6
N.D.
+0.4
N.D.
stress
Cisplatin 0.001 mg/ml
+0.5
+0.7
N.D.
-0.2
N.D.
stress
Cobalt chloride 0.16 mM
+0.0
+0.9
N.D.
-0.0
N.D.
nutrient
L-Histidine
+0.3
+0.5
N.D.
+0.2
N.D.
nitrogen source
L-Glutamine (N)
+0.1
+0.3
N.D.
+0.7
N.D.
stress
Cisplatin 0.0005 mg/ml
+0.1
+0.7
N.D.
+0.3
N.D.
carbon source
acetate (C)
+0.3
+0.3
N.D.
+0.5
N.D.
lb
LB
-0.1
+1.4
N.D.
-0.1
N.D.
lb
LB
+0.0
+1.6
N.D.
-0.4
N.D.
stress
Paraquat dichloride 0.2 mg/ml
+0.1
+1.4
N.D.
-0.3
N.D.
pH
LB, pH8
+0.3
+1.6
N.D.
-0.5
N.D.
nitrogen source
L-Leucine (N)
+0.5
+0.6
N.D.
+0.3
N.D.
stress
D-Cycloserine 0.05 mg/ml
+0.3
+1.4
N.D.
-0.2
N.D.
stress
perchlorate 10 mM
+0.2
+1.6
N.D.
-0.1
N.D.
lb
LB
+0.1
+1.6
N.D.
+0.0
N.D.
pH
LB, pH8
+0.1
+1.9
N.D.
+0.1
N.D.
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