Fitness for 5 genes in Sinorhizobium meliloti 1021

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500 ntSMc01189 and SMc01188 are separated by 57 nucleotidesSMc01188 and SMc01187 are separated by 56 nucleotidesSMc01187 and SMc01186 are separated by 726 nucleotidesSMc01186 and SMc01243 are separated by 253 nucleotides SMc01189: SMc01189 - thymidylate kinase, at 1,740,782 to 1,741,486 SMc01189 SMc01188: SMc01188 - penicillin-binding precursor (D-alanyl-D-alanine carboxypeptidase fraction A) transmembrane protein, at 1,741,544 to 1,742,698 SMc01188 SMc01187: SMc01187 - rare lipoprotein A, at 1,742,755 to 1,743,795 SMc01187 SMc01186: SMc01186 - hypothetical protein, at 1,744,522 to 1,744,782 SMc01186 SMc01243: SMc01243 - tRNA-Ser, at 1,745,036 to 1,745,125 SMc01243
Group Condition SMc01189 SMc01188 SMc01187 SMc01186 SMc01243
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI N.D. N.D. -3.1 -0.9 N.D.
stress Polymyxin B sulfate 0.00005 mg/ml N.D. N.D. -3.8 -0.1 N.D.
nutrient L-Lysine N.D. N.D. -2.7 -0.4 N.D.
nutrient Min media with glucose N.D. N.D. -2.9 -0.1 N.D.
stress Paraquat dichloride 0.2 mg/ml N.D. N.D. -2.4 -0.5 N.D.
nitrogen source L-Leucine (N) N.D. N.D. -3.0 +0.2 N.D.
lb LB N.D. N.D. -2.4 -0.2 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI N.D. N.D. -2.2 -0.3 N.D.
stress perchlorate 10 mM N.D. N.D. -1.7 -0.8 N.D.
stress Cisplatin 0.001 mg/ml N.D. N.D. -2.7 +0.2 N.D.
stress Chlorite 0.1 mM N.D. N.D. -2.8 +0.4 N.D.
nutrient Min media with glucose N.D. N.D. -2.3 -0.1 N.D.
pH LB, pH6 N.D. N.D. -2.5 +0.1 N.D.
pH LB, pH8 N.D. N.D. -1.9 -0.5 N.D.
agar plate interaction control Parafilmed volatile agar plate with no fungus N.D. N.D. -1.7 -0.5 N.D.
pH LB, pH6 N.D. N.D. -1.5 -0.5 N.D.
carbon source D-Leucrose (C) N.D. N.D. -1.8 -0.2 N.D.
carbon source D-Tagatose (C) N.D. N.D. -1.6 -0.3 N.D.
stress copper (II) chloride 1 mM N.D. N.D. -1.8 -0.1 N.D.
r2a control R2A control for volatile experiments N.D. N.D. -1.8 +0.1 N.D.
carbon source Sucrose (C) N.D. N.D. -1.8 +0.1 N.D.
carbon source D-Arabinose (C) N.D. N.D. -1.7 +0.2 N.D.
stress A22 0.02 mg/ml N.D. N.D. -1.8 +0.3 N.D.
carbon source L-Lysine (C) N.D. N.D. -1.9 +0.4 N.D.
stress Thallium(I) acetate 0.001 mg/ml N.D. N.D. -1.9 +0.6 N.D.
nitrogen source Gly-DL-Asp (N) N.D. N.D. -1.7 +0.5 N.D.
agar plate interaction control Parafilmed volatile agar plate with no fungus N.D. N.D. -1.5 +0.4 N.D.
nitrogen source L-Histidine (N) N.D. N.D. -1.4 +0.5 N.D.
nitrogen source L-Arginine (N) N.D. N.D. -1.3 +0.7 N.D.
lb no stress control LB no stress control N.D. N.D. +1.4 -0.4 N.D.
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