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Cofit
Protein
Homologs
Fitness for 5 genes in
Sinorhizobium meliloti 1021
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500 nt
SMc01150 and SMc01149 are separated by 74 nucleotides
SMc01149 and SMc01148 are separated by 15 nucleotides
SMc01148 and SMc01147 are separated by 16 nucleotides
SMc01147 and SMc01146 are separated by 11 nucleotides
SMc01150: SMc01150 - hypothetical protein, at 401,348 to 402,619
SMc01150
SMc01149: SMc01149 - hypothetical protein, at 402,694 to 403,176
SMc01149
SMc01148: SMc01148 - hypothetical protein, at 403,192 to 404,058
SMc01148
SMc01147: SMc01147 - coproporphyrinogen III oxidase, at 404,075 to 405,256
SMc01147
SMc01146: SMc01146 - deoxyribonucleotide triphosphate pyrophosphatase, at 405,268 to 405,912
SMc01146
Group
Condition
SMc01150
SMc01149
SMc01148
SMc01147
SMc01146
pH
LB, pH8
-0.1
-0.2
+0.1
-4.1
-1.5
stress
Paraquat dichloride 0.3 mg/ml
-0.1
+0.1
-0.1
-4.2
-0.9
nitrogen source
L-Asparagine (N)
+0.0
-0.1
+0.1
-4.1
-0.6
stress
Fusidic 0.0001 mg/ml
-0.2
-0.2
-0.1
-2.6
-1.1
pH
LB, pH8
-0.2
+0.1
-0.2
-3.3
-0.5
stress
Sisomicin 0.004 mg/ml
+0.2
-0.0
-0.3
-3.3
-0.6
pH
LB, pH7
-0.1
-0.0
-0.0
-3.2
-0.7
stress
Cobalt chloride 0.16 mM
-0.0
-0.2
-0.2
-2.2
-1.1
stress
Aluminum chloride
-0.2
-0.5
+0.4
-2.9
-0.5
nutrient
L-Histidine
-0.1
+0.1
+0.1
-3.4
-0.4
stress
Paraquat dichloride 0.2 mg/ml
+0.1
-0.1
-0.0
-3.3
-0.4
carbon source
Maltitol (C)
-0.1
+0.3
+0.1
-3.5
-0.5
nutrient
L-Histidine
-0.1
+0.2
+0.0
-3.0
-0.6
stress
Polymyxin B sulfate 0.00005 mg/ml
-0.2
+0.4
+0.5
-3.4
-0.8
carbon source
D-Glucose (C)
-0.1
+0.3
-0.5
-2.9
-0.4
stress
D-Cycloserine 0.05 mg/ml
-0.3
+0.3
+0.3
-3.0
-0.8
nitrogen source
Gelatin (N)
+0.2
-0.1
+0.2
-2.5
-1.3
pH
LB, pH7
+0.0
+0.0
+0.2
-3.1
-0.6
nutrient
L-Lysine
-0.3
+0.1
+0.1
-2.3
-1.0
carbon source
D-Fructose (C)
+0.1
+0.3
-0.2
-3.2
-0.3
stress
Cisplatin 0.0005 mg/ml
+0.1
-0.1
+0.1
-3.8
+0.4
stress
nitrate 40 mM
+0.2
+0.4
+0.2
-3.3
-0.8
temperature
LB, 23C
+0.0
+0.3
+0.1
-3.0
-0.7
stress
Nickel (II) chloride 1 mM
-0.2
-0.1
+0.1
-3.3
+0.3
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.1
+0.3
-0.1
-2.0
-1.3
nutrient
Min media with glucose
-0.3
+0.0
+0.4
-3.1
-0.1
temperature
LB, 23C
-0.2
+0.4
+0.2
-2.5
-0.8
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+0.5
+0.2
+0.2
-2.0
-1.6
nitrogen source
L-Leucine (N)
-0.0
+0.8
-0.2
-2.5
-0.7
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-0.2
+0.4
+0.5
-2.1
-1.1
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