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Protein
Homologs
Fitness for 5 genes in
Sinorhizobium meliloti 1021
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
SMc01032 and SMc01033 are separated by 56 nucleotides
SMc01033 and SMc01034 overlap by 4 nucleotides
SMc01034 and SMc01035 are separated by 17 nucleotides
SMc01035 and SMc01036 are separated by 75 nucleotides
SMc01032: SMc01032 - dihydrolipoamide S-acetyltransferase, at 1,558,406 to 1,559,749
SMc01032
SMc01033: SMc01033 - arylesterase, at 1,559,806 to 1,560,447
SMc01033
SMc01034: SMc01034 - hypothetical protein, at 1,560,444 to 1,561,031
SMc01034
SMc01035: SMc01035 - dihydrolipoamide dehydrogenase, at 1,561,049 to 1,562,494
SMc01035
SMc01036: SMc01036 - hypothetical protein, at 1,562,570 to 1,562,821
SMc01036
Group
Condition
SMc01032
SMc01033
SMc01034
SMc01035
SMc01036
stress
Paraquat dichloride 0.2 mg/ml
N.D.
N.D.
-1.1
N.D.
-0.7
stress
3-octanone 0.456 mM
N.D.
N.D.
-0.6
N.D.
-1.2
stress
6-Pentyl-2H-pyran-2-one 0.4557668333 mM
N.D.
N.D.
-0.2
N.D.
-1.4
agar plate interaction control
Parafilmed volatile agar plate with no fungus
N.D.
N.D.
-0.7
N.D.
-0.9
stress
Paraquat dichloride 0.3 mg/ml
N.D.
N.D.
-1.1
N.D.
-0.5
dmso control
DMSO control
N.D.
N.D.
+0.0
N.D.
-1.5
stress
nitrate 40 mM
N.D.
N.D.
-0.4
N.D.
-0.8
stress
Cisplatin 0.0005 mg/ml
N.D.
N.D.
-0.0
N.D.
-1.1
stress
1-octen-3-ol 0.4933903333 mM
N.D.
N.D.
-0.2
N.D.
-1.0
agar plate interaction control
Parafilmed volatile agar plate with no fungus
N.D.
N.D.
-0.6
N.D.
-0.6
lb no stress control
LB no stress control
N.D.
N.D.
+0.1
N.D.
-1.2
carbon source
Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C)
N.D.
N.D.
-0.4
N.D.
-0.7
carbon source
L-Arabinose (C)
N.D.
N.D.
-0.7
N.D.
-0.4
stress
1-octen-3-ol 0.5427293333 mM
N.D.
N.D.
-0.1
N.D.
-0.8
stress
3-octanone 5.310333333 mM
N.D.
N.D.
+0.1
N.D.
-0.9
lb no stress control
LB no stress control
N.D.
N.D.
+0.1
N.D.
-0.8
stress
1-octen-3-ol 0.4933903333 mM
N.D.
N.D.
+0.2
N.D.
-0.9
carbon source
L-Alanine (C)
N.D.
N.D.
-0.8
N.D.
+0.3
stress
6-Pentyl-2H-pyran-2-one 0.4177863333 mM
N.D.
N.D.
+0.3
N.D.
-0.6
r2a-hepes control
R2A-HEPES control for volatile experiments
N.D.
N.D.
+0.4
N.D.
-0.6
volatiles
R2A-HEPES with volatiles from Trichoderma atroviridae IMI
N.D.
N.D.
+0.4
N.D.
-0.6
carbon source
pipercolic (C)
N.D.
N.D.
-0.6
N.D.
+0.5
r2a control
R2A control for volatile experiments
N.D.
N.D.
+0.7
N.D.
-0.3
stress
Polymyxin B sulfate 0.00005 mg/ml
N.D.
N.D.
-0.3
N.D.
+0.8
carbon source
NAG (C)
N.D.
N.D.
+0.3
N.D.
+0.6
nitrogen source
L-Arginine (N)
N.D.
N.D.
+0.7
N.D.
+0.2
nitrogen source
Uridine (N)
N.D.
N.D.
+0.6
N.D.
+0.3
nitrogen source
nitrate (N)
N.D.
N.D.
+0.8
N.D.
+0.3
stress
Chlorite 0.1 mM
N.D.
N.D.
+0.8
N.D.
+0.4
nitrogen source
Gelatin (N)
N.D.
N.D.
+0.7
N.D.
+0.5
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