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Cofit
Protein
Homologs
Fitness for 5 genes in
Sinorhizobium meliloti 1021
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Number of genes on each side:
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
SMc00982 and SMc00981 are separated by 2 nucleotides
SMc00981 and SMc00980 are separated by 1 nucleotides
SMc00980 and SMc00979 are separated by 295 nucleotides
SMc00979 and SMc00978 are separated by 472 nucleotides
SMc00982: SMc00982 - dioxygenase, at 955,077 to 956,321
SMc00982
SMc00981: SMc00981 - ferredoxin protein, at 956,324 to 957,418
SMc00981
SMc00980: SMc00980 - hypothetical protein, at 957,420 to 958,445
SMc00980
SMc00979: SMc00979 - hypothetical protein, at 958,741 to 959,154
SMc00979
SMc00978: SMc00978 - hypothetical protein, at 959,627 to 960,616
SMc00978
Group
Condition
SMc00982
SMc00981
SMc00980
SMc00979
SMc00978
carbon source
D-Salicin (C)
-5.1
-4.1
+0.1
-0.1
-0.2
carbon source
L-Lysine (C)
-3.9
-2.8
+0.1
-0.3
+0.0
carbon source
pipercolic (C)
-3.9
-2.9
+0.1
+0.0
-0.0
carbon source
D-Xylose (C)
-3.7
-2.7
+0.0
-0.1
-0.1
carbon source
L-Histidine (C)
-3.6
-2.6
+0.2
+0.1
-0.0
carbon source
L-Lysine (C)
-3.7
-2.5
+0.2
+0.2
+0.1
carbon source
D-Glucose (C)
-3.4
-2.2
+0.2
-0.2
+0.1
carbon source
Beta-Lactose (C)
-3.2
-2.6
+0.2
+0.1
+0.1
stress
1-octen-3-ol 0.4933903333 mM
-2.6
-2.5
-0.1
-0.2
+0.1
carbon source
pipercolic (C)
-3.4
-2.2
+0.2
-0.1
+0.3
carbon source
D-Glucose (C)
-3.2
-1.6
+0.0
-0.3
-0.1
stress
3-octanone 2.655166667 mM
-2.1
-2.5
-0.2
-0.2
-0.1
stress
Nickel (II) chloride 1 mM
-2.2
-2.3
+0.3
+0.0
-0.7
carbon source
L-Glutamine (C)
-2.8
-1.9
+0.0
-0.1
-0.1
stress
3-octanone 0.456 mM
-2.3
-2.2
-0.0
-0.2
+0.0
stress
6-Pentyl-2H-pyran-2-one 0.4557668333 mM
-1.9
-2.5
-0.2
-0.2
+0.0
stress
6-Pentyl-2H-pyran-2-one 0.4557668333 mM
-2.2
-2.3
-0.1
-0.2
+0.2
carbon source
Lactitol (C)
-3.2
-1.7
-0.0
+0.2
+0.1
carbon source
Lactulose (C)
-3.2
-1.4
-0.0
-0.1
+0.2
stress
6-Pentyl-2H-pyran-2-one 0.385649 mM
-2.1
-2.6
+0.1
+0.0
+0.1
carbon source
D-Xylose (C)
-2.8
-2.2
+0.3
+0.1
+0.3
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant
-3.1
-1.8
+0.2
+0.2
+0.1
nitrogen source
Gelatin (N)
-2.4
-2.2
+0.1
+0.2
-0.0
nutrient
Min media with glucose
-3.1
-1.4
+0.2
+0.0
+0.0
carbon source
Xylobiose (C)
-3.2
-1.2
+0.3
+0.0
-0.1
carbon source
pyruvate (C)
-3.1
-1.2
+0.1
+0.1
-0.1
carbon source
Lactitol (C)
-2.4
-2.0
+0.3
-0.1
+0.0
carbon source
Lactulose (C)
-3.1
-1.2
+0.1
+0.3
-0.2
carbon source
D-Trehalose (C)
-2.9
-1.3
+0.2
+0.1
+0.0
carbon source
D-Mannose (C)
-2.6
-1.6
+0.4
+0.1
-0.0
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