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Cofit
Protein
Homologs
Fitness for 5 genes in
Sinorhizobium meliloti 1021
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
SMc00971 and SMc00970 are separated by 216 nucleotides
SMc00970 and SMc00969 are separated by 3 nucleotides
SMc00969 and SMc00968 are separated by 62 nucleotides
SMc00968 and SMc00967 are separated by 13 nucleotides
SMc00971: SMc00971 - hypothetical protein, at 969,984 to 970,907
SMc00971
SMc00970: SMc00970 - exodeoxyribonuclease VII small subunit, at 971,124 to 971,375
SMc00970
SMc00969: SMc00969 - hypothetical protein, at 971,379 to 972,308
SMc00969
SMc00968: SMc00968 - oxidoreductase, at 972,371 to 973,339
SMc00968
SMc00967: SMc00967 - hypothetical protein, at 973,353 to 973,754
SMc00967
Group
Condition
SMc00971
SMc00970
SMc00969
SMc00968
SMc00967
stress
Nickel (II) chloride 1 mM
-0.0
-3.5
-0.2
-0.2
-0.1
stress
D-Cycloserine 0.05 mg/ml
-0.4
-2.5
-0.1
+0.0
+0.0
in planta
Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish)
-0.3
-1.4
-0.0
-0.2
-0.2
stress
nitrate 40 mM
+0.2
-1.6
-0.0
-0.3
-0.1
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
+0.0
-1.7
-0.1
+0.0
-0.1
nitrogen source
D-Glucosamine Hydrochloride (N)
-0.2
-0.8
-0.4
-0.1
-0.2
pH
LB, pH6
-0.2
-0.7
-0.6
+0.1
-0.2
stress
Chloride 200 mM
+0.1
-1.3
-0.4
-0.0
-0.0
stress
Paraquat dichloride 0.05 mg/ml
-0.0
-1.2
-0.1
-0.4
+0.2
nitrogen source
L-Glutamine (N)
-0.2
-0.9
-0.1
-0.2
-0.2
stress
Cobalt chloride 0.16 mM
-0.3
-1.1
-0.0
-0.2
+0.0
stress
Cisplatin 0.001 mg/ml
+0.4
-1.5
+0.1
+0.0
-0.5
carbon source
D-Glucosamine Hydrochloride (C)
+0.1
-1.0
-0.4
-0.2
+0.0
pH
LB, pH6
-0.2
-1.0
-0.5
-0.0
+0.2
stress
copper (II) chloride 1 mM
-0.3
-1.5
+0.2
+0.3
-0.1
stress
Paraquat dichloride 0.2 mg/ml
+0.2
-1.5
+0.1
-0.2
+0.1
nitrogen source
nitrate (N)
-0.2
+0.2
-0.3
-0.5
-0.5
stress
Chlorite 0.1 mM
-0.1
-0.7
+0.2
-0.4
-0.4
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+0.3
-1.1
-0.2
+0.2
-0.5
stress
Paraquat dichloride 0.3 mg/ml
+0.2
-0.8
-0.0
-0.3
-0.3
carbon source
L-Lysine (C)
+0.2
-1.3
-0.1
-0.0
+0.0
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant
+0.1
-1.3
-0.1
+0.1
-0.0
stress
copper (II) chloride 1 mM
+0.2
-1.2
-0.0
+0.1
-0.1
in planta
Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish)
-0.1
-1.3
-0.1
+0.0
+0.4
nitrogen source
L-Asparagine (N)
+0.1
-1.4
+0.1
-0.1
+0.4
stress
Polymyxin B sulfate 0.00005 mg/ml
-0.2
-1.2
+0.1
+0.1
+0.2
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+0.0
-1.0
+0.3
+0.1
-0.1
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+0.2
-1.1
+0.1
+0.2
-0.1
nitrogen source
L-Histidine (N)
-0.1
+0.8
-0.2
-0.7
-0.2
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+0.3
+0.6
-0.3
+0.2
+0.2
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