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Cofit
Protein
Homologs
Fitness for 5 genes in
Sinorhizobium meliloti 1021
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500 nt
SMc00791 and SMc00792 are separated by 152 nucleotides
SMc00792 and SMc00793 are separated by 101 nucleotides
SMc00793 and SMc00794 are separated by 26 nucleotides
SMc00794 and SMc00795 are separated by 524 nucleotides
SMc00791: SMc00791 - hypothetical protein, at 812,854 to 813,198
SMc00791
SMc00792: SMc00792 - hypothetical protein, at 813,351 to 813,521
SMc00792
SMc00793: SMc00793 - permease, at 813,623 to 814,753
SMc00793
SMc00794: SMc00794 - two-component response regulator, at 814,780 to 815,577
SMc00794
SMc00795: SMc00795 - hypothetical protein, at 816,102 to 816,350
SMc00795
Group
Condition
SMc00791
SMc00792
SMc00793
SMc00794
SMc00795
nitrogen source
L-Arginine (N)
-3.8
-0.5
-0.7
-0.2
-0.3
stress
perchlorate 10 mM
-1.9
+0.0
-0.1
+0.4
-0.4
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-1.5
-0.3
-0.3
+0.2
-0.1
nitrogen source
NAG (N)
-1.9
+0.2
-0.2
+0.3
-0.1
stress
Cisplatin 0.0005 mg/ml
-2.0
-0.0
-0.1
+0.6
-0.1
carbon source
5-Aminovaleric (C)
-1.8
-0.4
-0.0
+1.1
-0.3
r2a control
R2A control
-1.2
+0.1
+0.1
+0.4
-0.7
stress
nitrate 40 mM
-0.9
-0.8
-0.3
+0.7
-0.2
stress
Thallium(I) acetate 0.001 mg/ml
-0.4
-0.7
-0.3
+0.6
-0.4
stress
Cisplatin 0.001 mg/ml
-0.7
-0.6
-0.2
+0.7
-0.2
lb
LB
+0.2
-0.5
-0.4
+0.4
-0.6
stress
Polymyxin B sulfate 0.00005 mg/ml
-1.2
-0.6
+0.1
+0.4
+0.6
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
+0.5
-0.7
-0.0
-0.6
+0.4
nitrogen source
Gelatin (N)
-0.4
+0.8
-0.4
+0.5
-0.7
nutrient
Min media with glucose
+1.0
-0.5
-0.3
+0.8
-0.4
carbon source
Protocatechuic Acid (C)
-0.5
-0.2
-0.2
+1.3
+0.3
pH
LB, pH6
+0.7
+0.0
-0.2
+0.7
-0.4
carbon source
D-Ribose (C)
+0.1
-0.1
-0.1
+1.4
-0.3
carbon source
L-Lysine (C)
-0.5
+0.1
-0.2
+1.4
+0.3
carbon source
L-Lysine (C)
+0.2
-0.4
-0.1
+1.3
+0.2
carbon source
D-Ribose (C)
-0.2
+0.5
-0.2
+1.3
+0.0
in planta
Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish)
-0.2
+0.5
+0.6
+0.9
-0.0
carbon source
NAG (C)
+1.0
+0.5
+0.2
+0.3
-0.1
carbon source
L-Alanine (C)
-1.0
+0.4
+0.1
+2.5
+0.0
carbon source
Myristic (C)
-1.1
-0.2
-0.0
+2.9
+0.4
carbon source
L-Alanine (C)
-0.1
-0.2
+0.0
+2.4
+0.0
carbon source
pipercolic (C)
-0.1
+0.4
-0.2
+2.5
-0.3
carbon source
Myristic (C)
-0.4
-0.3
+0.0
+3.1
-0.1
carbon source
pipercolic (C)
-0.2
+0.2
-0.0
+2.6
-0.1
carbon source
Uridine (C)
+0.4
+0.3
-0.0
+1.6
+0.4
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