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Cofit
Protein
Homologs
Fitness for 5 genes in
Sinorhizobium meliloti 1021
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
SMc00730 and SMc00729 are separated by 299 nucleotides
SMc00729 and SMc00728 are separated by 116 nucleotides
SMc00728 and SMc00727 are separated by 143 nucleotides
SMc00727 and SMc00726 are separated by 37 nucleotides
SMc00730: SMc00730 - hypothetical protein, at 2,849,603 to 2,850,394
SMc00730
SMc00729: SMc00729 - electron transfer flavoprotein BETA-subunit BETA-ETF flavoprotein small subunit, at 2,850,694 to 2,851,443
SMc00729
SMc00728: SMc00728 - electron transfer flavoprotein alpha-subunit alpha-ETF flavoprotein, at 2,851,560 to 2,852,489
SMc00728
SMc00727: SMc00727 - 3-hydroxybutyryl-CoA dehydrogenase, at 2,852,633 to 2,853,505
SMc00727
SMc00726: SMc00726 - thiol:disulfide interchange redox-active center transmembrane protein, at 2,853,543 to 2,854,217
SMc00726
Group
Condition
SMc00730
SMc00729
SMc00728
SMc00727
SMc00726
carbon source
acetate (C)
+0.2
N.D.
N.D.
-4.7
-3.0
carbon source
L-Leucine (C)
+0.1
N.D.
N.D.
-0.8
-4.6
carbon source
L-Lysine (C)
+0.0
N.D.
N.D.
-0.4
-4.5
carbon source
5-Aminovaleric (C)
+0.2
N.D.
N.D.
-1.6
-3.0
carbon source
acetate (C)
+0.0
N.D.
N.D.
-4.4
+0.1
nitrogen source
L-Leucine (N)
+0.1
N.D.
N.D.
+0.2
-4.5
carbon source
pipercolic (C)
+0.0
N.D.
N.D.
-1.2
-3.0
nitrogen source
Gly-DL-Asp (N)
+0.1
N.D.
N.D.
+0.3
-4.5
stress
copper (II) chloride 1 mM
-0.0
N.D.
N.D.
+0.7
-4.7
nitrogen source
L-Histidine (N)
+0.4
N.D.
N.D.
+0.0
-4.3
nitrogen source
L-Asparagine (N)
+0.4
N.D.
N.D.
+0.1
-4.2
carbon source
D-Glucose (C)
+0.1
N.D.
N.D.
-0.7
-3.0
carbon source
D-Mannose (C)
-0.1
N.D.
N.D.
-0.6
-2.8
carbon source
pipercolic (C)
+0.2
N.D.
N.D.
-0.7
-3.0
carbon source
D-Glucosamine Hydrochloride (C)
+0.2
N.D.
N.D.
-0.9
-2.8
stress
Cisplatin 0.001 mg/ml
-0.0
N.D.
N.D.
+1.2
-4.5
carbon source
L-Arabinose (C)
+0.2
N.D.
N.D.
-0.5
-3.0
carbon source
methyl 3-keto-a-D-glucopyranoside (C)
-0.0
N.D.
N.D.
-0.5
-2.8
carbon source
Fumarate (C)
+0.4
N.D.
N.D.
-0.1
-3.0
stress
Paraquat dichloride 0.2 mg/ml
-0.0
N.D.
N.D.
+0.8
-3.5
nitrogen source
L-Arginine (N)
+0.3
N.D.
N.D.
+1.0
-3.7
stress
Thallium(I) acetate 0.0025 mg/ml
-0.1
N.D.
N.D.
+1.3
-3.5
stress
nitrate 40 mM
-0.2
N.D.
N.D.
+1.3
-3.3
lb
LB
+0.2
N.D.
N.D.
+2.3
-3.0
stress
perchlorate 10 mM
-0.0
N.D.
N.D.
+2.1
-2.5
stress
Nickel (II) chloride 1 mM
+0.2
N.D.
N.D.
+3.9
-4.0
lb
LB
+0.0
N.D.
N.D.
+1.8
-1.5
stress
D-Cycloserine 0.05 mg/ml
+0.3
N.D.
N.D.
+2.4
-1.6
lb
LB
+0.3
N.D.
N.D.
+2.2
-1.0
r2a-hepes control
R2A-HEPES control for volatile experiments
-0.1
N.D.
N.D.
-0.3
+3.0
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