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Protein
Homologs
Fitness for 5 genes in
Sinorhizobium meliloti 1021
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500 nt
SMc00693 and SMc00692 are separated by 287 nucleotides
SMc00692 and SMc00691 overlap by 4 nucleotides
SMc00691 and SMc00690 are separated by 63 nucleotides
SMc00690 and SMc00689 are separated by 244 nucleotides
SMc00693: SMc00693 - hypothetical protein, at 2,885,640 to 2,885,915
SMc00693
SMc00692: SMc00692 - signal peptide protein, at 2,886,203 to 2,886,352
SMc00692
SMc00691: SMc00691 - site-specific tyrosine recombinase XerD, at 2,886,349 to 2,887,284
SMc00691
SMc00690: SMc00690 - acetyl-CoA carboxylase carboxyltransferase subunit alpha, at 2,887,348 to 2,888,301
SMc00690
SMc00689: SMc00689 - lipoprotein, at 2,888,546 to 2,889,988
SMc00689
Group
Condition
SMc00693
SMc00692
SMc00691
SMc00690
SMc00689
agar plate interaction control
Parafilmed volatile agar plate with no fungus
N.D.
N.D.
-5.4
N.D.
-1.4
stress
Polymyxin B sulfate 0.00005 mg/ml
N.D.
N.D.
-3.1
N.D.
-3.3
stress
Cisplatin 0.0005 mg/ml
N.D.
N.D.
-3.1
N.D.
-1.7
stress
Fusidic 0.0001 mg/ml
N.D.
N.D.
-0.8
N.D.
-3.7
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
N.D.
N.D.
-0.1
N.D.
-4.1
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
N.D.
N.D.
-2.0
N.D.
-1.8
in planta
Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish)
N.D.
N.D.
-3.4
N.D.
-0.1
agar plate interaction control
Parafilmed volatile agar plate with no fungus
N.D.
N.D.
-1.6
N.D.
-1.9
agar plate interaction control
Parafilmed volatile agar plate with no fungus
N.D.
N.D.
-1.5
N.D.
-1.9
agar plate interaction control
Parafilmed volatile agar plate with no fungus
N.D.
N.D.
-1.4
N.D.
-1.9
in planta
Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish)
N.D.
N.D.
-3.2
N.D.
-0.1
stress
Sisomicin 0.004 mg/ml
N.D.
N.D.
-1.0
N.D.
-1.9
agar plate interaction control
Parafilmed volatile agar plate with no fungus
N.D.
N.D.
-0.5
N.D.
-2.5
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
N.D.
N.D.
+0.2
N.D.
-3.0
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
N.D.
N.D.
-0.4
N.D.
-2.4
carbon source
L-Histidine (C)
N.D.
N.D.
-0.2
N.D.
-2.4
stress
perchlorate 10 mM
N.D.
N.D.
-0.6
N.D.
-1.9
carbon source
Myristic (C)
N.D.
N.D.
+0.1
N.D.
-2.3
agar plate interaction control
Parafilmed volatile agar plate with no fungus
N.D.
N.D.
-0.8
N.D.
-1.3
carbon source
D-Glucose (C)
N.D.
N.D.
-0.8
N.D.
-1.3
tsb
Day4 TSB
N.D.
N.D.
+0.1
N.D.
-2.1
stress
sodium fluoride 100 mM
N.D.
N.D.
-0.8
N.D.
-1.2
lb
LB
N.D.
N.D.
-1.3
N.D.
-0.7
stress
D-Cycloserine 0.05 mg/ml
N.D.
N.D.
-1.3
N.D.
-0.7
pH
LB, pH8
N.D.
N.D.
-1.2
N.D.
-0.8
nutrient
L-Lysine
N.D.
N.D.
-1.4
N.D.
-0.6
stress
copper (II) chloride 1 mM
N.D.
N.D.
-1.0
N.D.
-0.9
carbon source
D-Tagatose (C)
N.D.
N.D.
-1.0
N.D.
-0.9
lb no stress control
LB no stress control
N.D.
N.D.
-1.8
N.D.
-0.0
nitrogen source
L-Arginine (N)
N.D.
N.D.
+0.7
N.D.
+1.5
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