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Cofit
Protein
Homologs
Fitness for 5 genes in
Sinorhizobium meliloti 1021
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
SMc00655 and SMc00654 are separated by 550 nucleotides
SMc00654 and SMc00653 are separated by 374 nucleotides
SMc00653 and SMc00652 are separated by 242 nucleotides
SMc00652 and SMc00651 are separated by 364 nucleotides
SMc00655: SMc00655 - hypothetical protein, at 2,921,179 to 2,921,529
SMc00655
SMc00654: SMc00654 - response regulator,controls chromosomal replication initiation protein, at 2,922,080 to 2,922,781
SMc00654
SMc00653: SMc00653 - 2-component receiver domain-containing protein, at 2,923,156 to 2,923,524
SMc00653
SMc00652: SMc00652 - hypothetical protein, at 2,923,767 to 2,924,432
SMc00652
SMc00651: SMc00651 - hypothetical protein, at 2,924,797 to 2,925,399
SMc00651
Group
Condition
SMc00655
SMc00654
SMc00653
SMc00652
SMc00651
dmso control
DMSO control
N.D.
N.D.
-0.5
N.D.
N.D.
r2a control
R2A control for volatile experiments
N.D.
N.D.
-0.5
N.D.
N.D.
carbon source
L-Lysine (C)
N.D.
N.D.
-0.4
N.D.
N.D.
stress
6-Pentyl-2H-pyran-2-one 0.4177863333 mM
N.D.
N.D.
-0.4
N.D.
N.D.
dmso control
DMSO control
N.D.
N.D.
-0.4
N.D.
N.D.
nitrogen source
Cytosine (N)
N.D.
N.D.
-0.4
N.D.
N.D.
nitrogen source
L-Asparagine (N)
N.D.
N.D.
-0.3
N.D.
N.D.
in planta
Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish)
N.D.
N.D.
-0.3
N.D.
N.D.
r2a-hepes control
R2A-HEPES control for volatile experiments
N.D.
N.D.
-0.3
N.D.
N.D.
stress
3-octanone 2.655166667 mM
N.D.
N.D.
-0.3
N.D.
N.D.
stress
3-octanone 0.456 mM
N.D.
N.D.
-0.3
N.D.
N.D.
lb
LB
N.D.
N.D.
-0.3
N.D.
N.D.
nutrient
L-Lysine
N.D.
N.D.
+0.3
N.D.
N.D.
carbon source
methyl 3-keto-a-D-glucopyranoside (C)
N.D.
N.D.
+0.3
N.D.
N.D.
stress
copper (II) chloride 1 mM
N.D.
N.D.
+0.3
N.D.
N.D.
stress
nitrate 40 mM
N.D.
N.D.
+0.3
N.D.
N.D.
stress
Aluminum chloride
N.D.
N.D.
+0.3
N.D.
N.D.
nutrient
L-Lysine
N.D.
N.D.
+0.3
N.D.
N.D.
agar plate interaction control
Parafilmed volatile agar plate with no fungus
N.D.
N.D.
+0.3
N.D.
N.D.
carbon source
Fumarate (C)
N.D.
N.D.
+0.4
N.D.
N.D.
stress
Polymyxin B sulfate 0.00005 mg/ml
N.D.
N.D.
+0.4
N.D.
N.D.
nitrogen source
L-Histidine (N)
N.D.
N.D.
+0.4
N.D.
N.D.
nutrient
Min media with glucose
N.D.
N.D.
+0.4
N.D.
N.D.
stress
perchlorate 10 mM
N.D.
N.D.
+0.4
N.D.
N.D.
carbon source
acetate (C)
N.D.
N.D.
+0.4
N.D.
N.D.
stress
Paraquat dichloride 0.3 mg/ml
N.D.
N.D.
+0.4
N.D.
N.D.
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
N.D.
N.D.
+0.4
N.D.
N.D.
agar plate interaction control
Parafilmed volatile agar plate with no fungus
N.D.
N.D.
+0.4
N.D.
N.D.
agar plate interaction control
Parafilmed volatile agar plate with no fungus
N.D.
N.D.
+0.5
N.D.
N.D.
nitrogen source
D-Glucosamine Hydrochloride (N)
N.D.
N.D.
+0.7
N.D.
N.D.
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