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Cofit
Protein
Homologs
Fitness for 5 genes in
Sinorhizobium meliloti 1021
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
SMc00619 and SMc00620 are separated by 136 nucleotides
SMc00620 and SMc00621 are separated by 70 nucleotides
SMc00621 and SMc00622 are separated by 205 nucleotides
SMc00622 and SMc01754 are separated by 81 nucleotides
SMc00619: SMc00619 - hypothetical protein, at 1,292,337 to 1,293,860
SMc00619
SMc00620: SMc00620 - signal peptide protein, at 1,293,997 to 1,295,355
SMc00620
SMc00621: SMc00621 - adenylate cyclase 2 protein, at 1,295,426 to 1,296,517
SMc00621
SMc00622: SMc00622 - ribonuclease D protein, at 1,296,723 to 1,297,874
SMc00622
SMc01754: SMc01754 - oxidoreductase, at 1,297,956 to 1,299,350
SMc01754
Group
Condition
SMc00619
SMc00620
SMc00621
SMc00622
SMc01754
stress
Fusidic 0.0001 mg/ml
-4.3
+0.2
-0.1
-1.4
-0.1
nitrogen source
Gelatin (N)
-5.4
+0.1
-0.2
+0.2
+0.1
carbon source
Lactulose (C)
-4.9
-0.1
+0.2
-0.5
+0.2
carbon source
D-Mannose (C)
-3.7
-0.1
-0.1
-0.9
-0.1
stress
Sisomicin 0.004 mg/ml
-4.0
+0.0
-0.0
-0.1
-0.2
stress
copper (II) chloride 1 mM
-5.4
+0.3
+0.1
+1.1
+0.2
carbon source
D-Trehalose (C)
-3.7
+0.0
+0.1
-0.1
+0.0
carbon source
methyl 3-keto-a-D-glucopyranoside (C)
-3.5
+0.2
-0.0
-0.2
-0.1
carbon source
D-Glucosamine Hydrochloride (C)
-3.3
-0.0
+0.2
-0.5
+0.0
stress
Thallium(I) acetate 0.001 mg/ml
-4.1
+0.4
-0.1
+0.5
-0.2
stress
D-Cycloserine 0.05 mg/ml
-4.4
+0.4
-0.1
+1.4
-0.3
stress
Nickel (II) chloride 1 mM
-3.7
-0.1
+0.4
+0.9
-0.1
stress
Paraquat dichloride 0.2 mg/ml
-3.2
+0.6
-0.0
+0.2
-0.2
stress
Nickel (II) chloride 0.5 mM
-4.0
+0.2
-0.0
+1.4
-0.1
stress
Cisplatin 0.0005 mg/ml
-4.5
+0.4
-0.1
+1.8
-0.1
stress
Paraquat dichloride 0.3 mg/ml
-3.7
+0.1
+0.0
+1.3
-0.1
stress
Cisplatin 0.001 mg/ml
-4.4
+0.1
-0.0
+2.0
+0.0
stress
Paraquat dichloride 0.2 mg/ml
-2.5
-0.1
-0.1
+1.3
+0.0
nitrogen source
NAG (N)
-2.8
-0.2
+0.0
+1.7
+0.2
stress
nitrate 40 mM
-2.8
-0.1
-0.3
+2.4
-0.0
stress
Aluminum chloride
-2.4
+0.4
+0.4
+1.0
-0.1
stress
Paraquat dichloride 0.05 mg/ml
-2.9
+0.7
-0.0
+1.7
-0.1
nitrogen source
L-Arginine (N)
-4.1
+0.4
+0.0
+3.2
-0.1
lb
LB
-2.6
+0.6
-0.1
+2.2
-0.0
pH
LB, pH6
-3.1
+0.3
+0.1
+3.2
-0.2
pH
LB, pH6
-3.2
+0.5
-0.2
+3.3
-0.0
lb
LB
-1.8
+0.5
-0.0
+1.7
+0.0
stress
Polymyxin B sulfate 0.00005 mg/ml
-1.8
+0.6
+0.4
+1.6
+0.1
stress
Chlorite 0.1 mM
-1.8
+0.6
+0.2
+2.3
-0.0
stress
perchlorate 10 mM
-2.3
+0.5
+0.1
+3.3
+0.1
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