Fitness for 5 genes in Sinorhizobium meliloti 1021

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500 ntSMc00578 and SMc00579 are separated by 221 nucleotidesSMc00579 and SMc00580 overlap by 1 nucleotidesSMc00580 and SMc00581 are separated by 9 nucleotidesSMc00581 and SMc00582 are separated by 191 nucleotides SMc00578: SMc00578 - hypothetical protein, at 1,247,904 to 1,248,032 SMc00578 SMc00579: SMc00579 - dimethyladenosine transferase, at 1,248,254 to 1,249,078 SMc00579 SMc00580: SMc00580 - 4-hydroxythreonine-4-phosphate dehydrogenase, at 1,249,078 to 1,250,106 SMc00580 SMc00581: SMc00581 - hypothetical protein, at 1,250,116 to 1,251,066 SMc00581 SMc00582: SMc00582 - hypothetical protein, at 1,251,258 to 1,253,603 SMc00582
Group Condition SMc00578 SMc00579 SMc00580 SMc00581 SMc00582
stress Fusidic 0.0001 mg/ml N.D. -2.0 -3.4 N.D. N.D.
carbon source Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C) N.D. +0.0 -5.4 N.D. N.D.
carbon source Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C) N.D. -0.1 -4.9 N.D. N.D.
stress Nickel (II) chloride 0.5 mM N.D. -1.4 -3.4 N.D. N.D.
agar plate interaction control Parafilmed volatile agar plate with no fungus N.D. -1.9 -2.6 N.D. N.D.
lb LB N.D. -1.9 -2.1 N.D. N.D.
stress Paraquat dichloride 0.05 mg/ml N.D. -1.5 -2.4 N.D. N.D.
stress D-Cycloserine 0.05 mg/ml N.D. -1.5 -2.4 N.D. N.D.
carbon source L-Lysine (C) N.D. -1.2 -2.4 N.D. N.D.
stress Polymyxin B sulfate 0.00005 mg/ml N.D. -1.6 -1.7 N.D. N.D.
agar plate interaction control Parafilmed volatile agar plate with no fungus N.D. -0.8 -2.4 N.D. N.D.
stress Paraquat dichloride 0.2 mg/ml N.D. -1.3 -1.9 N.D. N.D.
lb LB N.D. -1.3 -1.8 N.D. N.D.
volatiles R2A-HEPES with volatiles from Trichoderma atroviridae IMI N.D. -0.7 -2.4 N.D. N.D.
stress Nickel (II) chloride 1 mM N.D. -0.5 -2.6 N.D. N.D.
stress Thallium(I) acetate 0.001 mg/ml N.D. -0.8 -2.2 N.D. N.D.
lb LB N.D. -0.9 -2.1 N.D. N.D.
stress Paraquat dichloride 0.3 mg/ml N.D. -1.0 -2.0 N.D. N.D.
temperature LB, 30C N.D. -1.3 -1.5 N.D. N.D.
carbon source L-Arabinose (C) N.D. -0.6 -2.2 N.D. N.D.
stress 1-octen-3-ol 0.5427293333 mM N.D. -0.2 -2.6 N.D. N.D.
agar plate interaction control Parafilmed volatile agar plate with no fungus N.D. -1.5 -1.2 N.D. N.D.
lb no stress control LB no stress control N.D. -0.2 -2.5 N.D. N.D.
temperature LB, 30C N.D. -0.9 -1.8 N.D. N.D.
volatiles R2A-HEPES with volatiles from Trichoderma atroviridae IMI N.D. -1.1 -1.6 N.D. N.D.
lb no stress control LB no stress control N.D. -0.4 -2.2 N.D. N.D.
carbon source L-Arabinose (C) N.D. -0.6 -2.1 N.D. N.D.
carbon source L-Lysine (C) N.D. -0.9 -1.8 N.D. N.D.
stress Paraquat dichloride 0.2 mg/ml N.D. -0.9 -1.7 N.D. N.D.
agar plate interaction control Parafilmed volatile agar plate with no fungus N.D. -1.7 -0.9 N.D. N.D.
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