Fitness for 5 genes in Sinorhizobium meliloti 1021

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500 ntSMc00555 and SMc00556 are separated by 68 nucleotidesSMc00556 and SMc00557 are separated by 63 nucleotidesSMc00557 and SMc00558 are separated by 133 nucleotidesSMc00558 and SMc00559 are separated by 64 nucleotides SMc00555: SMc00555 - colicin V production transmembrane protein, at 1,225,300 to 1,225,899 SMc00555 SMc00556: SMc00556 - DNA repair protein RadA, at 1,225,968 to 1,227,431 SMc00556 SMc00557: SMc00557 - alanine racemase, at 1,227,495 to 1,228,634 SMc00557 SMc00558: SMc00558 - transcriptional regulator, at 1,228,768 to 1,229,625 SMc00558 SMc00559: SMc00559 - hypothetical protein, at 1,229,690 to 1,230,460 SMc00559
Group Condition SMc00555 SMc00556 SMc00557 SMc00558 SMc00559
stress D-Cycloserine 0.05 mg/ml -1.4 -1.7 -4.6 -0.1 -0.2
nitrogen source L-Asparagine (N) -5.1 -1.0 -0.9 +0.1 -0.1
stress Cisplatin 0.001 mg/ml -1.5 -2.7 -0.6 -0.1 -0.1
nitrogen source D-Glucosamine Hydrochloride (N) -2.1 -1.1 -0.5 -0.3 -0.5
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.5 -1.7 -1.4 -0.0 +0.1
carbon source L-Alanine (C) -2.9 -0.5 -0.4 -0.3 +0.0
lb LB -0.4 -1.6 -1.1 -0.1 -0.4
stress Paraquat dichloride 0.3 mg/ml -1.1 -0.5 -1.3 -0.3 -0.4
stress nitrite 20 mM -0.5 -1.1 -1.9 -0.1 -0.1
stress Cobalt chloride 0.16 mM -0.9 -1.3 -0.8 -0.0 -0.7
stress Thallium(I) acetate 0.001 mg/ml -0.9 -1.0 -1.1 -0.4 -0.1
stress Polymyxin B sulfate 0.00005 mg/ml -0.5 -1.5 -1.3 -0.1 -0.1
in planta Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish) +0.4 -3.6 -0.6 +0.2 +0.1
stress Aluminum chloride -1.5 -1.1 -1.0 +0.2 -0.0
stress Cisplatin 0.0005 mg/ml +0.1 -2.9 -0.8 -0.2 +0.4
nitrogen source L-Histidine (N) -1.9 -0.2 -0.9 -0.2 -0.2
pH LB, pH8 -1.2 -0.7 -0.7 -0.3 -0.5
lb LB -1.2 -0.9 -0.9 -0.1 -0.2
stress Paraquat dichloride 0.2 mg/ml -1.2 -0.7 -0.8 -0.2 -0.3
stress 3-octanone 5.310333333 mM -1.6 -1.2 -0.1 -0.1 +0.0
stress perchlorate 10 mM -2.2 -0.7 -0.3 -0.2 +0.2
nitrogen source L-Glutamine (N) -1.1 -0.7 -0.5 -0.2 -0.5
carbon source D-Glucose (C) -1.2 -1.0 -0.4 +0.1 -0.5
carbon source acetate (C) -1.2 -1.3 -0.1 +0.0 -0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.3 -1.6 -1.2 -0.2 -0.1
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.8 -1.5 -1.0 -0.0 +0.6
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.5 -1.2 -1.4 -0.1 -0.3
in planta Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish) +0.3 -2.5 +0.0 -0.1 +0.1
stress Chlorite 0.1 mM +0.5 -1.0 -0.6 -0.3 -0.5
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.3 -1.3 -0.9 -0.1 +0.4
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