Fitness for 5 genes in Sinorhizobium meliloti 1021

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500 ntSMc00536 and SMc00535 are separated by 115 nucleotidesSMc00535 and SMc00534 overlap by 4 nucleotidesSMc00534 and SMc00486 are separated by 228 nucleotidesSMc00486 and SMc00485 are separated by 145 nucleotides SMc00536: SMc00536 - transporter, at 1,926,116 to 1,927,345 SMc00536 SMc00535: SMc00535 - hypothetical protein, at 1,927,461 to 1,928,285 SMc00535 SMc00534: SMc00534 - C32 tRNA thiolase, at 1,928,282 to 1,929,223 SMc00534 SMc00486: SMc00486 - Glutaminase (EC 3.5.1.2) (from data), at 1,929,452 to 1,930,399 SMc00486 SMc00485: SMc00485 - 30S ribosomal protein S4, at 1,930,545 to 1,931,162 SMc00485
Group Condition SMc00536 SMc00535 SMc00534 SMc00486 SMc00485
carbon source L-Glutamine (C) +0.0 +0.2 -0.1 -5.5 N.D.
nitrogen source L-Histidine (N) -0.2 -0.6 -0.1 -0.3 N.D.
nitrogen source L-Leucine (N) -0.1 -0.6 -0.1 -0.4 N.D.
carbon source pipercolic (C) -0.2 -0.3 -0.2 -0.2 N.D.
stress Cobalt chloride 0.16 mM -0.2 -0.1 -0.5 -0.1 N.D.
stress Nickel (II) chloride 1 mM +0.1 +0.3 -0.8 -0.4 N.D.
nitrogen source Uridine (N) +0.1 -0.6 -0.0 -0.3 N.D.
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.2 -0.6 +0.1 +0.1 N.D.
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.0 -0.7 +0.2 -0.0 N.D.
stress Aluminum chloride +0.2 -0.4 -0.3 -0.1 N.D.
carbon source methyl-beta-D-xylopyranoside (C) -0.2 -0.5 +0.0 +0.2 N.D.
stress Sisomicin 0.004 mg/ml -0.0 +0.1 -0.6 +0.1 N.D.
pH LB, pH8 +0.2 -0.3 -0.2 -0.2 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.4 -0.2 +0.2 +0.1 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.1 +0.4 -0.6 -0.1 N.D.
carbon source methyl 3-keto-a-D-glucopyranoside (C) +0.3 -0.4 -0.1 +0.1 N.D.
stress Cisplatin 0.0005 mg/ml -0.2 +0.3 +0.1 -0.3 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.3 +0.1 -0.2 +0.3 N.D.
nitrogen source Gly-DL-Asp (N) -0.0 +0.4 -0.3 -0.2 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.3 +0.4 -0.1 +0.1 N.D.
stress Nickel (II) chloride 0.5 mM +0.1 +0.5 -0.4 -0.2 N.D.
pH LB, pH6 +0.1 +0.6 -0.5 -0.1 N.D.
nitrogen source L-Asparagine (N) +0.1 -0.5 +0.4 -0.0 N.D.
carbon source D-Mannitol (C) +0.2 -0.4 +0.3 +0.2 N.D.
r2a control R2A control for volatile experiments +0.1 +0.4 +0.1 -0.2 N.D.
stress Polymyxin B sulfate 0.00005 mg/ml +0.2 +0.6 -0.3 +0.1 N.D.
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.4 +0.5 -0.1 -0.1 N.D.
stress copper (II) chloride 1 mM +0.2 +0.6 +0.2 -0.2 N.D.
stress 6-Pentyl-2H-pyran-2-one 0.385649 mM +0.2 +0.4 +0.2 +0.1 N.D.
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.4 +0.3 +0.3 +0.0 N.D.
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