Fitness for 5 genes in Sinorhizobium meliloti 1021

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500 ntSMc00404 and SMc00405 are separated by 460 nucleotidesSMc00405 and SMc00406 are separated by 59 nucleotidesSMc00406 and SMc00407 are separated by 10 nucleotidesSMc00407 and SMc00408 are separated by 156 nucleotides SMc00404: SMc00404 - hypothetical protein, at 355,519 to 355,893 SMc00404 SMc00405: SMc00405 - hypothetical protein, at 356,354 to 357,229 SMc00405 SMc00406: SMc00406 - 4Fe-4S ferredoxin, at 357,289 to 358,389 SMc00406 SMc00407: SMc00407 - glutathione S-transferase, at 358,400 to 359,092 SMc00407 SMc00408: SMc00408 - UDP pyrophosphate phosphatase, at 359,249 to 360,055 SMc00408
Group Condition SMc00404 SMc00405 SMc00406 SMc00407 SMc00408
carbon source methyl-beta-D-xylopyranoside (C) -1.3 -4.4 +0.1 N.D. N.D.
agar plate interaction control Parafilmed volatile agar plate with no fungus -4.5 -0.4 -0.6 N.D. N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -4.5 -0.2 -0.6 N.D. N.D.
agar plate interaction control Parafilmed volatile agar plate with no fungus -3.2 +0.0 -1.2 N.D. N.D.
carbon source methyl-beta-D-xylopyranoside (C) -0.3 -4.0 +0.0 N.D. N.D.
carbon source Maltitol (C) -1.1 -3.0 -0.1 N.D. N.D.
carbon source D-Leucrose (C) -0.3 -3.9 -0.1 N.D. N.D.
carbon source Protocatechuic Acid (C) -2.0 -1.7 -0.2 N.D. N.D.
stress copper (II) chloride 1 mM -3.4 -0.0 -0.4 N.D. N.D.
carbon source palatinose (C) -0.5 -3.0 -0.4 N.D. N.D.
carbon source Maltitol (C) -0.3 -2.7 -0.3 N.D. N.D.
carbon source D-Leucrose (C) +0.1 -3.0 -0.1 N.D. N.D.
carbon source Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C) +0.2 -2.9 -0.1 N.D. N.D.
carbon source methyl 3-keto-a-D-glucopyranoside (C) -1.1 -1.8 +0.1 N.D. N.D.
carbon source palatinose (C) +0.4 -2.9 -0.1 N.D. N.D.
carbon source Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C) +0.5 -3.0 -0.0 N.D. N.D.
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.9 +0.2 -0.7 N.D. N.D.
pH LB, pH6 -1.3 -0.1 -0.9 N.D. N.D.
carbon source Protocatechuic Acid (C) -1.2 -1.3 +0.1 N.D. N.D.
carbon source D-Glucose (C) -1.1 -1.1 -0.2 N.D. N.D.
carbon source Xylobiose (C) +0.2 -2.2 -0.1 N.D. N.D.
nitrogen source L-Asparagine (N) -1.9 +0.2 -0.4 N.D. N.D.
nitrogen source nitrate (N) +0.9 -2.6 -0.4 N.D. N.D.
carbon source Xylobiose (C) +1.0 -2.1 -0.1 N.D. N.D.
nutrient L-Histidine +1.1 -1.4 -0.1 N.D. N.D.
nutrient L-Lysine +1.3 -1.1 -0.2 N.D. N.D.
carbon source D-Glucose (C) +1.4 -1.2 +0.1 N.D. N.D.
nutrient Min media with glucose +1.7 -1.4 +0.1 N.D. N.D.
nutrient Min media with glucose +1.8 -1.1 -0.1 N.D. N.D.
stress Aluminum chloride +2.2 -0.1 +0.1 N.D. N.D.
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