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Protein
Homologs
Fitness for 5 genes in
Sinorhizobium meliloti 1021
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
SMc00383 and SMc00384 are separated by 23 nucleotides
SMc00384 and SMc00385 are separated by 291 nucleotides
SMc00385 and SMc00386 are separated by 3 nucleotides
SMc00386 and SMc00387 are separated by 208 nucleotides
SMc00383: SMc00383 - glutathione S-transferase, at 337,026 to 337,712
SMc00383
SMc00384: SMc00384 - transcriptional regulation protein, at 337,736 to 338,245
SMc00384
SMc00385: SMc00385 - hypothetical protein, at 338,537 to 339,010
SMc00385
SMc00386: SMc00386 - hypothetical protein, at 339,014 to 339,364
SMc00386
SMc00387: SMc00387 - aromatic amino acid aminotransferase, at 339,573 to 340,742
SMc00387
Group
Condition
SMc00383
SMc00384
SMc00385
SMc00386
SMc00387
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-0.8
-0.9
+0.3
-0.2
+0.0
carbon source
D-Glucose (C)
-0.3
-0.2
-0.4
-0.2
-0.4
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-0.4
-0.6
-0.3
-0.0
+0.0
carbon source
5-Aminovaleric (C)
-0.6
-0.2
-0.1
+0.0
-0.4
stress
Nickel (II) chloride 0.5 mM
-0.4
-0.5
+0.2
-0.5
+0.1
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.5
+0.2
+0.0
-0.3
-0.4
carbon source
L-Alanine (C)
-0.6
-0.2
-0.1
+0.2
-0.3
nitrogen source
L-Histidine (N)
-0.7
-0.4
-0.3
+0.1
+0.4
stress
Polymyxin B sulfate 0.00005 mg/ml
+0.2
-0.8
-0.4
+0.2
+0.1
stress
3-octanone 0.456 mM
-0.9
-0.3
+0.1
+0.0
+0.4
stress
Nickel (II) chloride 1 mM
+0.7
-0.7
-0.3
-0.2
-0.2
stress
Aluminum chloride
+0.3
-0.5
+0.1
-0.1
-0.3
stress
Thallium(I) acetate 0.001 mg/ml
+0.6
-0.3
-0.2
-0.4
-0.3
lb
LB
+0.4
-0.1
-0.2
-0.6
+0.1
carbon source
acetate (C)
-0.4
-0.6
-0.1
+0.5
+0.3
nitrogen source
L-Asparagine (N)
-0.2
-0.4
-0.0
-0.2
+0.6
stress
nitrate 40 mM
+0.7
+0.1
-0.3
-0.3
-0.4
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-0.9
+0.2
+0.2
+0.3
+0.0
stress
Paraquat dichloride 0.3 mg/ml
+0.6
+0.1
-0.2
-0.5
-0.2
nitrogen source
NAG (N)
+0.2
-0.0
-0.0
+0.4
-0.6
stress
Thallium(I) acetate 0.0025 mg/ml
+0.4
-0.4
+0.2
-0.3
+0.2
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.5
+0.3
+0.3
-0.4
+0.4
nitrogen source
D-Glucosamine Hydrochloride (N)
+0.1
-0.7
+0.5
-0.0
+0.2
nitrogen source
nitrate (N)
+0.4
-0.6
-0.0
+0.3
+0.3
nitrogen source
L-Leucine (N)
+0.8
-1.0
+0.3
-0.2
+0.4
r2a control
R2A control for volatile experiments
-0.6
+0.6
+0.2
+0.5
-0.3
nitrogen source
L-Arginine (N)
+0.5
-0.5
+0.1
-0.2
+0.6
nitrogen source
Gelatin (N)
+0.8
-0.5
+0.2
+0.0
+0.2
carbon source
Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C)
+0.6
+0.4
-0.1
-0.1
-0.2
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+0.8
+0.1
+0.0
+0.6
-0.4
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