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Protein
Homologs
Fitness for 5 genes in
Sinorhizobium meliloti 1021
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
SMc00343 and SMc00344 are separated by 619 nucleotides
SMc00344 and SMc00345 are separated by 179 nucleotides
SMc00345 and SMc00346 are separated by 202 nucleotides
SMc00346 and SMc00347 are separated by 93 nucleotides
SMc00343: SMc00343 - transposase, at 299,237 to 300,409
SMc00343
SMc00344: SMc00344 - hypothetical protein, at 301,029 to 301,319
SMc00344
SMc00345: SMc00345 - hypothetical protein, at 301,499 to 301,780
SMc00345
SMc00346: SMc00346 - hypothetical protein, at 301,983 to 302,435
SMc00346
SMc00347: SMc00347 - nucleoside diphosphate kinase regulator, at 302,529 to 302,936
SMc00347
Group
Condition
SMc00343
SMc00344
SMc00345
SMc00346
SMc00347
agar plate interaction control
Parafilmed volatile agar plate with no fungus
N.D.
-1.0
-0.1
-0.2
-1.2
nitrogen source
L-Arginine (N)
N.D.
+0.2
-1.2
+0.2
-1.2
stress
Chlorite 0.1 mM
N.D.
+0.2
-0.4
-0.1
-1.6
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
N.D.
-0.1
-0.3
+0.2
-1.3
pH
LB, pH6
N.D.
-0.3
+0.3
-0.8
-0.8
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
N.D.
-0.3
-0.8
-0.1
-0.4
stress
Sisomicin 0.004 mg/ml
N.D.
-0.2
+0.2
+0.1
-1.5
carbon source
acetate (C)
N.D.
-0.7
+0.2
-0.5
-0.2
in planta
Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish)
N.D.
+0.3
-0.9
+0.3
-0.5
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
N.D.
+0.3
-0.2
+0.3
-1.0
stress
3-octanone 0.456 mM
N.D.
+0.4
+0.4
-0.3
-0.8
stress
Nickel (II) chloride 1 mM
N.D.
-0.7
-0.3
+0.0
+0.8
agar plate interaction control
Parafilmed volatile agar plate with no fungus
N.D.
+0.6
+0.1
+0.2
-0.8
stress
Paraquat dichloride 0.2 mg/ml
N.D.
+0.5
+0.3
+0.3
-1.0
agar plate interaction control
Parafilmed volatile agar plate with no fungus
N.D.
+0.3
+0.8
-0.7
-0.2
nitrogen source
Gelatin (N)
N.D.
+0.8
+0.4
-0.4
-0.4
stress
nitrate 40 mM
N.D.
+0.9
+0.2
+0.0
-0.7
carbon source
D-Tagatose (C)
N.D.
-0.2
-0.4
+0.1
+0.9
stress
Aluminum chloride
N.D.
+1.2
-0.7
+0.1
-0.1
nutrient
L-Lysine
N.D.
-0.4
+0.5
-0.1
+0.5
stress
D-Cycloserine 0.05 mg/ml
N.D.
-0.1
+0.2
-0.5
+1.0
nitrogen source
D-Glucosamine Hydrochloride (N)
N.D.
+0.6
-0.4
-0.3
+0.8
nitrogen source
Cytosine (N)
N.D.
-0.1
+0.3
-0.4
+0.8
nitrogen source
NAG (N)
N.D.
+1.0
+0.2
-0.3
-0.2
nitrogen source
L-Asparagine (N)
N.D.
+0.7
-0.2
-0.4
+0.7
stress
perchlorate 10 mM
N.D.
-0.4
+0.3
+0.2
+0.9
stress
copper (II) chloride 1 mM
N.D.
+0.9
+0.4
+0.5
-0.6
r2a control
R2A control for volatile experiments
N.D.
+0.2
-0.1
+0.2
+1.1
agar plate interaction control
Parafilmed volatile agar plate with no fungus
N.D.
+1.3
-0.1
+0.5
-0.1
stress
Cisplatin 0.001 mg/ml
N.D.
+0.9
+0.4
+0.3
+0.1
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