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Cofit
Protein
Homologs
Fitness for 5 genes in
Sinorhizobium meliloti 1021
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
SMc00128 and SMc00457 overlap by 8 nucleotides
SMc00457 and SMc00122 are separated by 97 nucleotides
SMc00122 and SMc00064 are separated by 120 nucleotides
SMc00064 and SMc00123 are separated by 61 nucleotides
SMc00128: SMc00128 - hypothetical protein, at 1,099,690 to 1,100,235
SMc00128
SMc00457: SMc00457 - hypothetical protein, at 1,100,228 to 1,100,815
SMc00457
SMc00122: SMc00122 - penicillin-binding protein, at 1,100,913 to 1,103,147
SMc00122
SMc00064: SMc00064 - hypothetical protein, at 1,103,268 to 1,103,735
SMc00064
SMc00123: SMc00123 - hypothetical protein, at 1,103,797 to 1,104,132
SMc00123
Group
Condition
SMc00128
SMc00457
SMc00122
SMc00064
SMc00123
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
N.D.
N.D.
N.D.
-1.0
N.D.
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
N.D.
N.D.
N.D.
-0.7
N.D.
carbon source
Maltitol (C)
N.D.
N.D.
N.D.
-0.4
N.D.
stress
copper (II) chloride 1 mM
N.D.
N.D.
N.D.
-0.4
N.D.
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
N.D.
N.D.
N.D.
-0.4
N.D.
carbon source
L-Lysine (C)
N.D.
N.D.
N.D.
+0.4
N.D.
nitrogen source
NAG (N)
N.D.
N.D.
N.D.
+0.4
N.D.
stress
Fusidic 0.0001 mg/ml
N.D.
N.D.
N.D.
+0.5
N.D.
carbon source
L-Lysine (C)
N.D.
N.D.
N.D.
+0.5
N.D.
stress
Cobalt chloride 0.16 mM
N.D.
N.D.
N.D.
+0.5
N.D.
stress
Paraquat dichloride 0.3 mg/ml
N.D.
N.D.
N.D.
+0.5
N.D.
stress
A22 0.02 mg/ml
N.D.
N.D.
N.D.
+0.5
N.D.
temperature
LB, 30C
N.D.
N.D.
N.D.
+0.5
N.D.
pH
LB, pH7
N.D.
N.D.
N.D.
+0.5
N.D.
stress
Nickel (II) chloride 0.5 mM
N.D.
N.D.
N.D.
+0.5
N.D.
nitrogen source
Gly-DL-Asp (N)
N.D.
N.D.
N.D.
+0.5
N.D.
temperature
LB, 23C
N.D.
N.D.
N.D.
+0.5
N.D.
temperature
LB, 23C
N.D.
N.D.
N.D.
+0.6
N.D.
stress
Cisplatin 0.001 mg/ml
N.D.
N.D.
N.D.
+0.6
N.D.
stress
Paraquat dichloride 0.05 mg/ml
N.D.
N.D.
N.D.
+0.7
N.D.
stress
Aluminum chloride
N.D.
N.D.
N.D.
+0.7
N.D.
nitrogen source
L-Arginine (N)
N.D.
N.D.
N.D.
+0.7
N.D.
stress
Sisomicin 0.004 mg/ml
N.D.
N.D.
N.D.
+0.8
N.D.
stress
Thallium(I) acetate 0.001 mg/ml
N.D.
N.D.
N.D.
+0.9
N.D.
stress
Thallium(I) acetate 0.0025 mg/ml
N.D.
N.D.
N.D.
+0.9
N.D.
lb
LB
N.D.
N.D.
N.D.
+1.0
N.D.
stress
Polymyxin B sulfate 0.00005 mg/ml
N.D.
N.D.
N.D.
+1.0
N.D.
lb
LB
N.D.
N.D.
N.D.
+1.1
N.D.
stress
D-Cycloserine 0.05 mg/ml
N.D.
N.D.
N.D.
+1.1
N.D.
lb
LB
N.D.
N.D.
N.D.
+1.2
N.D.
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