Fitness for 5 genes in Sinorhizobium meliloti 1021

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500 ntSMc00020 and SMc00078 are separated by 205 nucleotidesSMc00078 and SMc00079 are separated by 128 nucleotidesSMc00079 and SMc00080 are separated by 184 nucleotidesSMc00080 and SMc00021 are separated by 169 nucleotides SMc00020: SMc00020 - hypothetical protein, at 1,010,785 to 1,011,330 SMc00020 SMc00078: SMc00078 - Leu/Ile/Val-binding protein, at 1,011,536 to 1,012,642 SMc00078 SMc00079: SMc00079 - hypothetical protein, at 1,012,771 to 1,013,466 SMc00079 SMc00080: SMc00080 - hypothetical protein, at 1,013,651 to 1,014,334 SMc00080 SMc00021: SMc00021 - adenine DNA methyltransferase, at 1,014,504 to 1,015,634 SMc00021
Group Condition SMc00020 SMc00078 SMc00079 SMc00080 SMc00021
carbon source D-Glucosamine Hydrochloride (C) N.D. -0.2 -1.5 +0.1 N.D.
carbon source Xylobiose (C) N.D. +0.1 -0.4 -1.0 N.D.
volatiles R2A-HEPES with volatiles from Trichoderma atroviridae IMI N.D. +0.1 -0.7 -0.6 N.D.
nutrient L-Lysine N.D. -0.1 -0.2 -0.8 N.D.
in planta Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish) N.D. +0.2 -0.4 -0.8 N.D.
carbon source D-Mannitol (C) N.D. +0.0 +0.2 -1.1 N.D.
r2a control R2A control for volatile experiments N.D. +0.0 -0.5 -0.5 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant N.D. -0.0 -0.9 +0.1 N.D.
carbon source Protocatechuic Acid (C) N.D. -0.0 +0.2 -0.9 N.D.
stress nitrite 20 mM N.D. -0.2 +0.4 -0.8 N.D.
carbon source m-Inositol (C) N.D. -0.1 +0.4 -0.7 N.D.
lb LB N.D. +0.1 +0.4 -0.8 N.D.
stress Thallium(I) acetate 0.0025 mg/ml N.D. +0.1 +0.3 -0.8 N.D.
nitrogen source L-Arginine (N) N.D. -0.1 +0.6 -0.6 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI N.D. +0.2 +1.0 -1.2 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI N.D. -0.1 +0.7 -0.4 N.D.
stress nitrate 40 mM N.D. -0.3 +0.9 -0.2 N.D.
agar plate interaction control Parafilmed volatile agar plate with no fungus N.D. +0.2 +0.6 -0.3 N.D.
carbon source L-Alanine (C) N.D. -0.3 +0.4 +0.6 N.D.
stress Paraquat dichloride 0.2 mg/ml N.D. -0.2 +0.5 +0.6 N.D.
nitrogen source L-Leucine (N) N.D. +0.2 -0.4 +1.2 N.D.
stress Chlorite 0.1 mM N.D. -0.4 +0.6 +0.8 N.D.
agar plate interaction control Parafilmed volatile agar plate with no fungus N.D. +0.1 +0.4 +0.5 N.D.
nitrogen source L-Glutamine (N) N.D. +0.0 -0.1 +1.1 N.D.
stress Sisomicin 0.004 mg/ml N.D. +0.3 +0.6 +0.2 N.D.
nitrogen source Cytosine (N) N.D. +0.0 -0.2 +1.4 N.D.
nitrogen source Gly-DL-Asp (N) N.D. +0.1 +0.0 +1.1 N.D.
nitrogen source D-Glucosamine Hydrochloride (N) N.D. +0.4 +0.2 +0.6 N.D.
nitrogen source NAG (N) N.D. +0.1 +0.8 +0.7 N.D.
stress Polymyxin B sulfate 0.00005 mg/ml N.D. +0.2 +0.6 +1.1 N.D.
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