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Protein
Homologs
Fitness for 5 genes in
Sinorhizobium meliloti 1021
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
SMc00053 and SMc00054 are separated by 6 nucleotides
SMc00054 and SMc00055 overlap by 4 nucleotides
SMc00055 and SMc00056 overlap by 4 nucleotides
SMc00056 and SMc00057 overlap by 1 nucleotides
SMc00053: SMc00053 - monovalent cation/H+ antiporter subunit C, at 1,087,825 to 1,088,202
SMc00053
SMc00054: SMc00054 - monovalent cation/H+ antiporter subunit D, at 1,088,209 to 1,089,774
SMc00054
SMc00055: SMc00055 - monovalent cation/H+ antiporter subunit E, at 1,089,771 to 1,090,247
SMc00055
SMc00056: SMc00056 - monovalent cation/H+ antiporter subunit F, at 1,090,244 to 1,090,615
SMc00056
SMc00057: SMc00057 - monovalent cation/H+ antiporter subunit G, at 1,090,615 to 1,090,965
SMc00057
Group
Condition
SMc00053
SMc00054
SMc00055
SMc00056
SMc00057
nitrogen source
nitrate (N)
-4.7
N.D.
N.D.
N.D.
N.D.
nitrogen source
L-Histidine (N)
-4.5
N.D.
N.D.
N.D.
N.D.
dmso control
DMSO control
-3.4
N.D.
N.D.
N.D.
N.D.
stress
3-octanone 2.655166667 mM
-3.4
N.D.
N.D.
N.D.
N.D.
stress
3-octanone 5.310333333 mM
-3.4
N.D.
N.D.
N.D.
N.D.
dmso control
DMSO control
-3.4
N.D.
N.D.
N.D.
N.D.
stress
6-Pentyl-2H-pyran-2-one 0.385649 mM
-3.3
N.D.
N.D.
N.D.
N.D.
carbon source
Glycerol (C)
-3.2
N.D.
N.D.
N.D.
N.D.
stress
Paraquat dichloride 0.2 mg/ml
-3.2
N.D.
N.D.
N.D.
N.D.
volatiles
R2A-HEPES with volatiles from Trichoderma atroviridae IMI
-3.2
N.D.
N.D.
N.D.
N.D.
nitrogen source
L-Serine (N)
-3.1
N.D.
N.D.
N.D.
N.D.
r2a-hepes control
R2A-HEPES control for volatile experiments
-2.9
N.D.
N.D.
N.D.
N.D.
volatiles
R2A-HEPES with volatiles from Trichoderma atroviridae IMI
-2.9
N.D.
N.D.
N.D.
N.D.
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-2.8
N.D.
N.D.
N.D.
N.D.
stress
Thallium(I) acetate 0.001 mg/ml
-2.7
N.D.
N.D.
N.D.
N.D.
r2a control
R2A control for volatile experiments
-2.7
N.D.
N.D.
N.D.
N.D.
stress
Paraquat dichloride 0.05 mg/ml
-2.7
N.D.
N.D.
N.D.
N.D.
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-2.7
N.D.
N.D.
N.D.
N.D.
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-2.7
N.D.
N.D.
N.D.
N.D.
stress
Chlorite 0.1 mM
-2.7
N.D.
N.D.
N.D.
N.D.
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-2.6
N.D.
N.D.
N.D.
N.D.
carbon source
acetate (C)
-2.6
N.D.
N.D.
N.D.
N.D.
carbon source
succinate (C)
-2.6
N.D.
N.D.
N.D.
N.D.
carbon source
Methyl beta-D-glucopyranoside (C)
-2.5
N.D.
N.D.
N.D.
N.D.
nitrogen source
L-Glutamine (N)
-2.3
N.D.
N.D.
N.D.
N.D.
stress
Chloride 200 mM
-2.2
N.D.
N.D.
N.D.
N.D.
carbon source
L-Arabinose (C)
-2.1
N.D.
N.D.
N.D.
N.D.
pH
LB, pH8
-2.1
N.D.
N.D.
N.D.
N.D.
pH
LB, pH8
-2.1
N.D.
N.D.
N.D.
N.D.
stress
3-octanone 0.456 mM
-2.1
N.D.
N.D.
N.D.
N.D.
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