Fitness for 5 genes in Sinorhizobium meliloti 1021

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500 ntSMa0132 and SMa0134 are separated by 110 nucleotidesSMa0134 and SMa5002 are separated by 40 nucleotidesSMa5002 and SMa0136 are separated by 247 nucleotidesSMa0136 and SMa0137 are separated by 91 nucleotides SMa0132: SMa0132 - hypothetical protein, at 70,668 to 70,955 SMa0132 SMa0134: SMa0134 - hypothetical protein, at 71,066 to 71,671 SMa0134 SMa5002: SMa5002 - hypothetical protein, at 71,712 to 72,026 SMa5002 SMa0136: SMa0136 - hypothetical protein, at 72,274 to 74,286 SMa0136 SMa0137: SMa0137 - Diguanylate cyclase/phosphodiesterase, at 74,378 to 76,579 SMa0137
Group Condition SMa0132 SMa0134 SMa5002 SMa0136 SMa0137
stress Thallium(I) acetate 0.001 mg/ml -1.6 -0.2 -0.5 +0.0 +0.1
stress Chlorite 0.1 mM -1.9 -0.2 +0.6 -0.5 -0.0
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -1.4 -0.4 +0.1 -0.2 -0.0
pH LB, pH6 -1.4 +0.1 -0.1 +0.1 -0.2
nitrogen source L-Leucine (N) -0.5 -0.2 -0.5 +0.1 -0.2
nitrogen source Uridine (N) -0.8 +0.0 -0.8 +0.1 +0.0
temperature LB, 23C -0.4 -0.2 -0.3 +0.0 -0.2
stress copper (II) chloride 1 mM -0.2 -0.0 -0.2 -0.2 -0.5
carbon source Protocatechuic Acid (C) -0.9 -0.2 +0.2 -0.1 -0.0
r2a-hepes control R2A-HEPES control for volatile experiments -0.5 +0.1 -0.3 -0.1 -0.1
stress Sisomicin 0.004 mg/ml -1.3 -0.1 +0.2 +0.1 +0.1
nitrogen source L-Glutamine (N) +0.1 +0.2 -0.8 -0.2 -0.1
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.2 +0.1 -0.7 -0.2 -0.0
nitrogen source D-Glucosamine Hydrochloride (N) -0.7 +0.5 -0.1 -0.3 -0.1
nitrogen source nitrate (N) -0.4 +0.1 -0.3 -0.2 +0.1
stress Fusidic 0.0001 mg/ml -0.6 +0.1 +0.1 -0.3 +0.0
r2a control R2A control for volatile experiments +0.2 -0.2 -0.6 -0.1 +0.0
stress nitrate 40 mM -0.4 -0.3 +0.4 +0.1 -0.0
nitrogen source Cytosine (N) +0.4 -0.1 -0.5 -0.1 +0.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.3 +0.1 -0.3 -0.3 +0.1
carbon source methyl-beta-D-xylopyranoside (C) -0.4 +0.1 +0.4 -0.0 -0.2
carbon source D-Glucose (C) -0.5 +0.1 +0.6 -0.1 -0.0
carbon source methyl 3-keto-a-D-glucopyranoside (C) -0.5 +0.3 +0.4 -0.1 +0.1
carbon source Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C) -0.2 +0.3 +0.5 -0.2 -0.0
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.7 -0.2 +0.2 -0.2 -0.1
stress Paraquat dichloride 0.3 mg/ml -0.1 -0.1 +0.8 -0.1 -0.0
r2a control R2A control for volatile experiments +1.0 -0.1 +0.0 -0.2 -0.0
r2a-hepes control R2A-HEPES control for volatile experiments +1.0 +0.0 -0.2 +0.2 -0.0
nitrogen source L-Arginine (N) +0.8 +0.4 +0.0 +0.0 +0.0
volatiles R2A-HEPES with volatiles from Trichoderma atroviridae IMI +0.7 +0.1 +0.2 +0.2 +0.0
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