Fitness for 5 genes in Sinorhizobium meliloti 1021

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500 ntSMa2410 and SMa2412 are separated by 73 nucleotidesSMa2412 and SMa2414 are separated by 168 nucleotidesSMa2414 and SMa2339 overlap by 1 nucleotidesSMa2339 and SMa2341 are separated by 200 nucleotides SMa2410: SMa2410 - RhbF rhizobactin siderophore biosynthesis protein RhsF, at 1,312,753 to 1,314,558 SMa2410 SMa2412: SMa2412 - RhrA transcriptional activator, at 1,314,632 to 1,315,576 SMa2412 SMa2414: SMa2414 - RhtA rhizobactin receptor precursor, at 1,315,745 to 1,317,985 SMa2414 SMa2339: SMa2339 - Siderophore biosynthesis protein, at 1,317,985 to 1,319,097 SMa2339 SMa2341: SMa2341 - LysR family transcriptional regulator, at 1,319,298 to 1,320,185 SMa2341
Group Condition SMa2410 SMa2412 SMa2414 SMa2339 SMa2341
pH LB, pH6 -0.2 -0.9 -0.9 -0.1 +0.3
stress copper (II) chloride 1 mM +0.0 -1.0 -0.8 +0.1 +0.3
stress Paraquat dichloride 0.2 mg/ml -0.2 -0.4 -0.3 -0.3 -0.1
carbon source Protocatechuic Acid (C) +0.1 -0.4 -0.3 -0.2 -0.2
pH LB, pH6 -0.0 -0.6 -0.8 +0.2 +0.1
stress perchlorate 10 mM -0.3 -0.5 -0.1 -0.2 -0.1
stress Chlorite 0.1 mM -0.3 -0.1 -0.4 -0.0 -0.2
stress Cisplatin 0.0005 mg/ml -0.1 -0.4 -0.3 -0.2 -0.0
nitrogen source L-Leucine (N) -0.1 -0.2 -0.1 -0.4 -0.2
carbon source Protocatechuic Acid (C) +0.1 -0.4 -0.3 -0.2 -0.1
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.2 +0.0 -0.0 -0.7 -0.2
carbon source L-Alanine (C) -0.1 -0.2 -0.1 +0.1 -0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.0 -0.5 -0.1 +0.2 -0.4
stress Paraquat dichloride 0.3 mg/ml +0.1 -0.4 -0.4 -0.1 +0.0
carbon source 5-Aminovaleric (C) -0.1 -0.2 +0.1 -0.2 -0.3
stress Fusidic 0.0001 mg/ml -0.1 -0.2 -0.2 -0.3 +0.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.4 -0.3 +0.0 -0.6 -0.1
nitrogen source L-Asparagine (N) +0.2 -0.4 -0.1 +0.0 -0.3
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.0 -0.0 -0.3 -0.6 +0.3
stress Nickel (II) chloride 1 mM +0.1 -0.4 -0.2 +0.3 -0.2
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.2 +0.0 -0.1 -0.5 +0.3
stress copper (II) chloride 1 mM -0.2 +0.1 -0.2 +0.3 -0.2
stress nitrate 40 mM +0.1 -0.2 -0.2 +0.3 -0.1
stress Thallium(I) acetate 0.001 mg/ml +0.3 -0.1 -0.3 -0.2 +0.2
stress Polymyxin B sulfate 0.00005 mg/ml -0.5 +0.1 +0.1 +0.5 -0.4
stress Cobalt chloride 0.16 mM +0.0 +0.2 +0.5 -0.3 -0.2
nitrogen source Uridine (N) +0.1 -0.1 +0.1 +0.6 -0.1
stress Aluminum chloride -0.3 +0.6 +0.4 +0.3 -0.3
stress Nickel (II) chloride 0.5 mM +0.1 +0.4 +0.5 +0.1 -0.2
r2a-hepes control R2A-HEPES control for volatile experiments -0.0 +0.1 +0.1 +0.6 +0.3
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