Fitness for 5 genes in Sinorhizobium meliloti 1021

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500 ntSMa2402 and SMa2404 overlap by 14 nucleotidesSMa2404 and SMa2406 overlap by 8 nucleotidesSMa2406 and SMa2408 overlap by 4 nucleotidesSMa2408 and SMa2410 overlap by 17 nucleotides SMa2402: SMa2402 - RhsB L-2,4-diaminobutyrate decarboxylase, at 1,307,588 to 1,309,075 SMa2402 SMa2404: SMa2404 - RhbC rhizobactin biosynthesis protein, at 1,309,062 to 1,310,819 SMa2404 SMa2406: SMa2406 - RhbD rhizobactin siderophore biosynthesis protein, at 1,310,812 to 1,311,402 SMa2406 SMa2408: SMa2408 - RhbE rhizobactin siderophore biosynthesis protein, at 1,311,399 to 1,312,769 SMa2408 SMa2410: SMa2410 - RhbF rhizobactin siderophore biosynthesis protein RhsF, at 1,312,753 to 1,314,558 SMa2410
Group Condition SMa2402 SMa2404 SMa2406 SMa2408 SMa2410
stress Paraquat dichloride 0.2 mg/ml -0.3 -0.6 -0.4 -0.2 -0.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.2 -0.2 -0.6 -0.2 -0.0
pH LB, pH6 -0.2 -0.1 -0.3 -0.3 -0.2
lb LB -0.2 -0.4 -0.2 -0.2 -0.1
carbon source Lactulose (C) -0.4 -0.2 -0.2 -0.2 -0.0
carbon source Maltitol (C) -0.1 -0.3 -0.4 -0.2 -0.0
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.3 -0.3 -0.3 +0.0 -0.2
stress Chlorite 0.1 mM +0.0 -0.2 -0.2 -0.3 -0.3
in planta Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish) -0.3 +0.1 -0.2 -0.2 -0.3
carbon source Beta-Lactose (C) -0.2 -0.3 -0.2 -0.2 -0.1
pH LB, pH8 -0.2 -0.1 -0.2 -0.2 -0.2
carbon source Lactitol (C) -0.1 -0.3 -0.3 -0.0 -0.1
stress Polymyxin B sulfate 0.00005 mg/ml +0.3 -0.5 -0.2 -0.0 -0.5
carbon source Lactulose (C) -0.2 -0.4 +0.0 -0.2 -0.1
nitrogen source NAG (N) -0.3 -0.4 -0.0 -0.2 +0.1
stress Paraquat dichloride 0.3 mg/ml -0.1 -0.4 -0.2 -0.1 +0.1
nitrogen source L-Asparagine (N) -0.4 -0.2 -0.0 -0.3 +0.2
carbon source D-Trehalose (C) +0.1 -0.2 -0.2 -0.2 -0.1
carbon source Beta-Lactose (C) -0.3 -0.4 -0.1 +0.1 -0.0
nitrogen source D-Glucosamine Hydrochloride (N) -0.4 -0.1 -0.3 +0.0 +0.2
carbon source D-Ribose (C) -0.5 +0.1 -0.1 -0.1 +0.0
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.4 -0.3 +0.0 +0.2 -0.1
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.0 -0.3 -0.3 -0.1 +0.2
stress Thallium(I) acetate 0.001 mg/ml -0.1 -0.4 -0.0 -0.2 +0.3
nitrogen source L-Arginine (N) +0.3 -0.6 -0.1 -0.1 +0.0
in planta Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish) -0.6 +0.4 -0.0 -0.2 +0.0
carbon source D-Fructose (C) -0.3 -0.2 +0.0 +0.3 -0.1
stress Sisomicin 0.004 mg/ml -0.2 +0.1 -0.4 +0.0 +0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.2 -0.2 -0.2 +0.1 +0.4
r2a-hepes control R2A-HEPES control for volatile experiments +0.2 +0.1 +0.3 -0.1 +0.1
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