Fitness for 5 genes in Sinorhizobium meliloti 1021

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 243 experiments or choose conditions or try the comparative fitness browser

500 ntSMa2387 and SMa2389 are separated by 208 nucleotidesSMa2389 and SMa2391 are separated by 304 nucleotidesSMa2391 and SMa2393 are separated by 155 nucleotidesSMa2393 and SMa2395 overlap by 4 nucleotides SMa2387: SMa2387 - TetR family transcriptional regulator, at 1,348,373 to 1,349,071 SMa2387 SMa2389: SMa2389 - OsmC-like protein, at 1,349,280 to 1,349,696 SMa2389 SMa2391: SMa2391 - replication initiation protein RepC, at 1,350,001 to 1,351,206 SMa2391 SMa2393: SMa2393 - RepB2 replication protein, at 1,351,362 to 1,352,363 SMa2393 SMa2395: SMa2395 - RepA2 replication protein, at 1,352,360 to 1,353,535 SMa2395
Group Condition SMa2387 SMa2389 SMa2391 SMa2393 SMa2395
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.6 -1.3 N.D. N.D. N.D.
stress perchlorate 10 mM +0.1 -1.5 N.D. N.D. N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.5 -0.8 N.D. N.D. N.D.
nitrogen source Gelatin (N) -0.4 -0.9 N.D. N.D. N.D.
nitrogen source L-Glutamine (N) -0.2 -0.8 N.D. N.D. N.D.
nitrogen source nitrate (N) -0.1 -0.9 N.D. N.D. N.D.
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.2 -1.1 N.D. N.D. N.D.
lb LB -0.1 -0.9 N.D. N.D. N.D.
carbon source D-Arabinose (C) -0.3 -0.6 N.D. N.D. N.D.
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.2 -0.7 N.D. N.D. N.D.
carbon source succinate (C) -0.5 -0.4 N.D. N.D. N.D.
stress copper (II) chloride 1 mM -0.4 -0.4 N.D. N.D. N.D.
volatiles R2A-HEPES with volatiles from Trichoderma atroviridae IMI -0.4 -0.4 N.D. N.D. N.D.
stress Fusidic 0.0001 mg/ml -0.2 -0.6 N.D. N.D. N.D.
stress nitrate 40 mM +0.2 -0.7 N.D. N.D. N.D.
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.4 -0.8 N.D. N.D. N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.6 +0.3 N.D. N.D. N.D.
r2a control R2A control for volatile experiments -0.5 +0.3 N.D. N.D. N.D.
carbon source D-Glucosamine Hydrochloride (C) -0.4 +0.3 N.D. N.D. N.D.
nitrogen source L-Arginine (N) +0.4 -0.5 N.D. N.D. N.D.
pH LB, pH6 +0.4 -0.4 N.D. N.D. N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.4 -0.4 N.D. N.D. N.D.
carbon source Xylobiose (C) -0.1 +0.7 N.D. N.D. N.D.
stress 1-octen-3-ol 0.5427293333 mM -0.1 +0.7 N.D. N.D. N.D.
nitrogen source L-Asparagine (N) +0.3 +0.4 N.D. N.D. N.D.
stress 3-octanone 2.655166667 mM +0.3 +0.4 N.D. N.D. N.D.
stress 6-Pentyl-2H-pyran-2-one 0.385649 mM +0.3 +0.5 N.D. N.D. N.D.
carbon source D-Cellobiose (C) +0.2 +0.7 N.D. N.D. N.D.
stress Polymyxin B sulfate 0.00005 mg/ml +0.3 +0.6 N.D. N.D. N.D.
in planta Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish) +0.2 +0.8 N.D. N.D. N.D.
remove
SMa2387
plot		 remove
SMa2389
plot		 remove
SMa2391		 remove
SMa2393
plot		 remove
SMa2395
plot