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Protein
Homologs
Fitness for 5 genes in
Sinorhizobium meliloti 1021
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
SMa2331 and SMa2333 are separated by 11 nucleotides
SMa2333 and SMa2335 are separated by 225 nucleotides
SMa2335 and SMa2337 are separated by 271 nucleotides
SMa2337 and SMa2400 are separated by 59 nucleotides
SMa2331: SMa2331 - potassium-transporting ATPase subunit B, at 1,300,360 to 1,302,402
SMa2331
SMa2333: SMa2333 - potassium-transporting ATPase subunit A, at 1,302,414 to 1,304,123
SMa2333
SMa2335: SMa2335 - hypothetical protein, at 1,304,349 to 1,304,552
SMa2335
SMa2337: SMa2337 - RhtX rhizobactin transporter, at 1,304,824 to 1,306,119
SMa2337
SMa2400: SMa2400 - diaminobutyrate--2-oxoglutarate aminotransferase, at 1,306,179 to 1,307,591
SMa2400
Group
Condition
SMa2331
SMa2333
SMa2335
SMa2337
SMa2400
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.5
-0.2
-0.5
-0.1
-0.3
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.4
-0.0
-0.8
-0.1
-0.2
nitrogen source
L-Asparagine (N)
-0.3
-0.4
-0.2
-0.2
-0.4
stress
3-octanone 5.310333333 mM
-0.2
+0.0
-0.8
-0.2
+0.0
pH
LB, pH6
-0.2
-0.0
-0.2
-0.5
-0.2
carbon source
Protocatechuic Acid (C)
+0.1
-0.1
-0.4
-0.4
-0.1
carbon source
D-Glucose (C)
-0.3
-0.1
-0.2
-0.2
-0.1
in planta
Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish)
+0.1
-0.4
+0.0
-0.4
-0.2
stress
perchlorate 10 mM
+0.1
-0.4
-0.3
-0.1
-0.1
stress
copper (II) chloride 1 mM
+0.2
+0.0
-0.3
-0.5
-0.3
stress
Cobalt chloride 0.16 mM
-0.3
-0.2
-0.1
+0.1
-0.2
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant
-0.4
-0.0
+0.1
+0.2
-0.6
stress
Paraquat dichloride 0.3 mg/ml
+0.3
-0.1
-0.0
-0.5
-0.3
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-0.1
-0.3
-0.3
-0.0
+0.2
pH
LB, pH6
-0.3
-0.0
+0.2
-0.6
+0.1
carbon source
D-Mannose (C)
-0.2
+0.1
-0.4
-0.1
+0.0
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-0.5
-0.1
-0.4
+0.4
+0.1
stress
Chlorite 0.1 mM
-0.2
+0.0
+0.4
-0.5
-0.2
stress
Paraquat dichloride 0.2 mg/ml
+0.0
-0.2
+0.4
-0.3
-0.4
stress
Cisplatin 0.001 mg/ml
-0.0
-0.2
+0.3
-0.1
-0.4
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.6
-0.1
-0.1
+0.1
+0.3
stress
Nickel (II) chloride 1 mM
-0.4
+0.1
-0.0
-0.1
+0.2
carbon source
pipercolic (C)
+0.1
+0.1
-0.3
-0.3
+0.2
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-0.5
+0.3
+0.1
+0.1
-0.0
stress
Polymyxin B sulfate 0.00005 mg/ml
+0.4
+0.1
+0.4
-0.4
-0.5
stress
Thallium(I) acetate 0.001 mg/ml
+0.3
-0.0
+0.3
-0.4
-0.1
r2a control
R2A control for volatile experiments
+0.2
+0.1
-0.4
+0.3
+0.2
r2a-hepes control
R2A-HEPES control for volatile experiments
+0.4
-0.1
-0.2
+0.1
+0.2
r2a-hepes control
R2A-HEPES control for volatile experiments
+0.4
+0.1
+0.1
+0.2
-0.2
r2a control
R2A control for volatile experiments
+0.5
+0.3
-0.1
+0.2
+0.2
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