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Protein
Homologs
Fitness for 5 genes in
Sinorhizobium meliloti 1021
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
SMa2313 and SMa2315 are separated by 131 nucleotides
SMa2315 and SMa2317 are separated by 9 nucleotides
SMa2317 and SMa2319 are separated by 107 nucleotides
SMa2319 and SMa2321 are separated by 537 nucleotides
SMa2313: SMa2313 - Oxidoreductase, at 1,289,113 to 1,291,146
SMa2313
SMa2315: SMa2315 - hypothetical protein, at 1,291,278 to 1,291,817
SMa2315
SMa2317: SMa2317 - hypothetical protein, at 1,291,827 to 1,292,054
SMa2317
SMa2319: SMa2319 - gst14 glutatione S-transferase, at 1,292,162 to 1,292,809
SMa2319
SMa2321: SMa2321 - UvrD2 DNA helicase, at 1,293,347 to 1,295,416
SMa2321
Group
Condition
SMa2313
SMa2315
SMa2317
SMa2319
SMa2321
stress
Polymyxin B sulfate 0.00005 mg/ml
+0.3
-1.0
-0.7
-0.3
-0.1
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant
-0.3
-0.3
-0.1
-0.7
+0.2
stress
Cisplatin 0.0005 mg/ml
+0.0
-0.7
-0.3
-0.1
-0.1
stress
Sisomicin 0.004 mg/ml
+0.0
-0.2
-0.7
-0.2
+0.1
carbon source
D-Xylose (C)
-0.3
+0.1
-0.6
-0.0
-0.2
carbon source
Myristic (C)
-0.2
+0.1
-0.6
-0.2
-0.2
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+0.0
-0.3
-0.7
-0.1
+0.1
stress
Thallium(I) acetate 0.0025 mg/ml
-0.7
-0.1
-0.4
+0.0
+0.2
r2a control
R2A control
-0.3
+0.2
-0.5
-0.4
+0.1
nitrogen source
L-Leucine (N)
-0.1
-0.3
+0.3
-0.8
+0.1
nitrogen source
L-Arginine (N)
+0.1
+0.3
-0.9
-0.1
-0.1
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-0.2
+0.2
-0.6
+0.1
-0.3
stress
nitrate 40 mM
-0.2
-0.5
-0.1
+0.4
+0.0
stress
6-Pentyl-2H-pyran-2-one 0.385649 mM
+0.0
+0.4
-0.4
-0.2
-0.2
carbon source
D-Glucose (C)
+0.1
-0.3
-0.2
+0.3
-0.2
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.5
+0.0
+0.6
-0.3
-0.0
nitrogen source
NAG (N)
-0.0
-0.2
+0.4
-0.5
+0.2
carbon source
D-Glucose (C)
+0.0
-0.2
+0.5
-0.4
-0.0
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
+0.1
+0.5
-0.7
-0.1
+0.1
nitrogen source
Gelatin (N)
+0.2
+0.1
+0.2
-0.6
+0.0
stress
Cisplatin 0.001 mg/ml
-0.3
+0.2
+0.3
-0.4
+0.1
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.1
+0.1
+0.6
-0.5
-0.1
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+0.1
-0.1
+0.6
-0.3
-0.2
stress
Paraquat dichloride 0.2 mg/ml
+0.1
-0.4
+0.6
+0.1
-0.0
carbon source
methyl 3-keto-a-D-glucopyranoside (C)
+0.0
+0.3
+0.6
-0.5
+0.3
carbon source
Xylobiose (C)
-0.1
+0.5
+0.7
-0.1
+0.0
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+0.0
+0.6
+0.3
+0.1
-0.1
carbon source
Methyl beta-D-glucopyranoside (C)
+0.1
+0.6
+0.5
-0.2
+0.0
r2a control
R2A control for volatile experiments
+0.1
+0.3
+0.5
+0.3
+0.0
volatiles
R2A-HEPES with volatiles from Trichoderma atroviridae IMI
+0.2
+0.2
+0.7
+0.2
+0.1
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