Fitness for 5 genes in Sinorhizobium meliloti 1021

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500 ntSMa2307 and SMa2309 overlap by 25 nucleotidesSMa2309 and SMa2311 overlap by 4 nucleotidesSMa2311 and SMa2313 overlap by 4 nucleotidesSMa2313 and SMa2315 are separated by 131 nucleotides SMa2307: SMa2307 - ABC transporter permease, at 1,286,173 to 1,287,096 SMa2307 SMa2309: SMa2309 - ABC transporter permease, at 1,287,072 to 1,287,893 SMa2309 SMa2311: SMa2311 - ABC transporter ATP-binding protein, at 1,287,890 to 1,289,116 SMa2311 SMa2313: SMa2313 - Oxidoreductase, at 1,289,113 to 1,291,146 SMa2313 SMa2315: SMa2315 - hypothetical protein, at 1,291,278 to 1,291,817 SMa2315
Group Condition SMa2307 SMa2309 SMa2311 SMa2313 SMa2315
stress Cisplatin 0.0005 mg/ml -0.6 +0.2 -0.5 +0.0 -0.7
stress nitrate 40 mM -0.3 -0.2 -0.1 -0.2 -0.5
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.2 -0.5 -0.0 -0.3 -0.3
pH LB, pH6 -0.3 -0.2 -0.3 -0.3 -0.1
stress perchlorate 10 mM -0.1 -0.5 -0.1 -0.2 -0.2
in planta Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish) +0.2 -0.5 -0.4 -0.2 -0.1
carbon source L-Lysine (C) -0.2 +0.1 -0.3 -0.4 -0.1
stress Paraquat dichloride 0.2 mg/ml -0.4 +0.0 -0.2 +0.1 -0.4
nitrogen source L-Leucine (N) +0.6 -0.4 -0.6 -0.1 -0.3
carbon source 5-Aminovaleric (C) -0.2 +0.2 -0.4 -0.1 -0.3
in planta Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish) +0.3 -0.2 -0.4 -0.3 -0.2
stress Thallium(I) acetate 0.0025 mg/ml -0.3 +0.6 -0.1 -0.7 -0.1
stress Paraquat dichloride 0.3 mg/ml -0.2 +0.3 -0.2 -0.1 -0.5
stress Polymyxin B sulfate 0.00005 mg/ml +0.3 +0.1 -0.2 +0.3 -1.0
stress Cisplatin 0.001 mg/ml +0.3 -0.0 -0.4 -0.3 +0.2
carbon source Maltitol (C) +0.3 -0.2 -0.2 -0.2 +0.2
stress D-Cycloserine 0.05 mg/ml +0.1 +0.5 -0.1 -0.4 +0.0
carbon source pipercolic (C) +0.3 +0.4 -0.3 -0.1 -0.3
stress Nickel (II) chloride 1 mM +0.4 -0.2 -0.2 +0.2 -0.2
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.5 +0.2 -0.1 +0.0 +0.6
nitrogen source NAG (N) +0.5 +0.2 -0.3 -0.0 -0.2
nitrogen source Gelatin (N) +0.6 -0.3 +0.1 +0.2 +0.1
r2a control R2A control for volatile experiments -0.2 +0.4 +0.1 +0.1 +0.3
nitrogen source Cytosine (N) +0.5 -0.1 +0.1 -0.0 +0.3
nitrogen source L-Asparagine (N) +0.7 -0.1 +0.1 +0.3 -0.2
nitrogen source L-Arginine (N) +0.6 -0.4 +0.2 +0.1 +0.3
carbon source D-Arabinose (C) +0.6 +0.2 +0.2 +0.0 +0.0
nitrogen source L-Glutamine (N) +0.7 +0.2 -0.0 +0.0 +0.3
carbon source Lactitol (C) +4.4 +2.0 +2.4 -0.3 -0.5
carbon source Lactitol (C) +4.6 +2.2 +2.5 -0.3 +0.1
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