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Protein
Homologs
Fitness for 5 genes in
Sinorhizobium meliloti 1021
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
SMa2307 and SMa2309 overlap by 25 nucleotides
SMa2309 and SMa2311 overlap by 4 nucleotides
SMa2311 and SMa2313 overlap by 4 nucleotides
SMa2313 and SMa2315 are separated by 131 nucleotides
SMa2307: SMa2307 - ABC transporter permease, at 1,286,173 to 1,287,096
SMa2307
SMa2309: SMa2309 - ABC transporter permease, at 1,287,072 to 1,287,893
SMa2309
SMa2311: SMa2311 - ABC transporter ATP-binding protein, at 1,287,890 to 1,289,116
SMa2311
SMa2313: SMa2313 - Oxidoreductase, at 1,289,113 to 1,291,146
SMa2313
SMa2315: SMa2315 - hypothetical protein, at 1,291,278 to 1,291,817
SMa2315
Group
Condition
SMa2307
SMa2309
SMa2311
SMa2313
SMa2315
stress
Cisplatin 0.0005 mg/ml
-0.6
+0.2
-0.5
+0.0
-0.7
stress
nitrate 40 mM
-0.3
-0.2
-0.1
-0.2
-0.5
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant
-0.2
-0.5
-0.0
-0.3
-0.3
pH
LB, pH6
-0.3
-0.2
-0.3
-0.3
-0.1
stress
perchlorate 10 mM
-0.1
-0.5
-0.1
-0.2
-0.2
in planta
Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish)
+0.2
-0.5
-0.4
-0.2
-0.1
carbon source
L-Lysine (C)
-0.2
+0.1
-0.3
-0.4
-0.1
stress
Paraquat dichloride 0.2 mg/ml
-0.4
+0.0
-0.2
+0.1
-0.4
nitrogen source
L-Leucine (N)
+0.6
-0.4
-0.6
-0.1
-0.3
carbon source
5-Aminovaleric (C)
-0.2
+0.2
-0.4
-0.1
-0.3
in planta
Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish)
+0.3
-0.2
-0.4
-0.3
-0.2
stress
Thallium(I) acetate 0.0025 mg/ml
-0.3
+0.6
-0.1
-0.7
-0.1
stress
Paraquat dichloride 0.3 mg/ml
-0.2
+0.3
-0.2
-0.1
-0.5
stress
Polymyxin B sulfate 0.00005 mg/ml
+0.3
+0.1
-0.2
+0.3
-1.0
stress
Cisplatin 0.001 mg/ml
+0.3
-0.0
-0.4
-0.3
+0.2
carbon source
Maltitol (C)
+0.3
-0.2
-0.2
-0.2
+0.2
stress
D-Cycloserine 0.05 mg/ml
+0.1
+0.5
-0.1
-0.4
+0.0
carbon source
pipercolic (C)
+0.3
+0.4
-0.3
-0.1
-0.3
stress
Nickel (II) chloride 1 mM
+0.4
-0.2
-0.2
+0.2
-0.2
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.5
+0.2
-0.1
+0.0
+0.6
nitrogen source
NAG (N)
+0.5
+0.2
-0.3
-0.0
-0.2
nitrogen source
Gelatin (N)
+0.6
-0.3
+0.1
+0.2
+0.1
r2a control
R2A control for volatile experiments
-0.2
+0.4
+0.1
+0.1
+0.3
nitrogen source
Cytosine (N)
+0.5
-0.1
+0.1
-0.0
+0.3
nitrogen source
L-Asparagine (N)
+0.7
-0.1
+0.1
+0.3
-0.2
nitrogen source
L-Arginine (N)
+0.6
-0.4
+0.2
+0.1
+0.3
carbon source
D-Arabinose (C)
+0.6
+0.2
+0.2
+0.0
+0.0
nitrogen source
L-Glutamine (N)
+0.7
+0.2
-0.0
+0.0
+0.3
carbon source
Lactitol (C)
+4.4
+2.0
+2.4
-0.3
-0.5
carbon source
Lactitol (C)
+4.6
+2.2
+2.5
-0.3
+0.1
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