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Gene
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Cofit
Protein
Homologs
Fitness for 5 genes in
Sinorhizobium meliloti 1021
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
SMa2259 and SMa2263 are separated by 925 nucleotides
SMa2263 and SMa2265 overlap by 11 nucleotides
SMa2265 and SMa2267 are separated by 75 nucleotides
SMa2267 and SMa2269 are separated by 182 nucleotides
SMa2259: SMa2259 - hypothetical protein, at 1,265,174 to 1,265,599
SMa2259
SMa2263: SMa2263 - hypothetical protein, at 1,266,525 to 1,266,860
SMa2263
SMa2265: SMa2265 - hypothetical protein, at 1,266,850 to 1,267,101
SMa2265
SMa2267: SMa2267 - hypothetical protein, at 1,267,177 to 1,267,614
SMa2267
SMa2269: SMa2269 - hypothetical protein, at 1,267,797 to 1,268,162
SMa2269
Group
Condition
SMa2259
SMa2263
SMa2265
SMa2267
SMa2269
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.1
-0.2
-1.3
-0.1
-0.2
stress
perchlorate 10 mM
+0.2
-0.4
-0.3
-0.5
-0.4
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.0
-0.7
-0.2
-0.3
-0.0
nitrogen source
L-Arginine (N)
+0.4
-0.4
+0.0
-0.5
-0.7
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
+0.8
+0.3
-1.3
-0.5
-0.3
stress
1-octen-3-ol 0.5427293333 mM
-0.4
-0.3
-0.4
+0.1
+0.0
stress
copper (II) chloride 1 mM
-0.1
+0.2
-1.1
-0.2
+0.0
temperature
LB, 23C
-0.2
-0.2
-0.4
+0.1
-0.3
r2a control
R2A control for volatile experiments
-0.2
-0.6
-0.3
+0.1
-0.1
nitrogen source
Uridine (N)
+0.3
-0.5
-0.4
-0.0
-0.3
stress
Cisplatin 0.0005 mg/ml
-0.7
-0.5
+0.0
+0.1
+0.3
temperature
LB, 23C
+0.3
-0.1
-0.0
-0.3
-0.5
nitrogen source
Gly-DL-Asp (N)
+0.2
-0.5
+0.5
-0.5
-0.3
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
+0.2
-0.3
-0.5
+0.1
-0.1
pH
LB, pH8
+0.3
+0.1
-0.6
-0.2
-0.2
carbon source
D-Glucose (C)
+0.3
-0.6
+0.1
-0.1
-0.1
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.2
+0.3
-0.2
-0.6
+0.2
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+0.6
-0.0
-0.4
+0.0
-0.5
nutrient
Min media with glucose
+0.1
+0.2
-0.5
-0.2
+0.3
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
+0.7
+0.1
-0.4
+0.0
-0.5
pH
LB, pH6
+0.6
-0.2
+0.2
-0.1
-0.4
nitrogen source
L-Leucine (N)
+0.3
+0.3
-0.3
-0.3
+0.2
lb
LB
+0.7
-0.0
-0.3
-0.0
-0.2
r2a control
R2A control for volatile experiments
+0.3
-0.6
+0.2
+0.2
+0.1
nitrogen source
Cytosine (N)
+0.9
-0.4
+0.2
-0.0
-0.4
carbon source
methyl-beta-D-xylopyranoside (C)
+0.5
-0.2
-0.2
+0.1
+0.2
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant
+0.2
-0.2
+0.5
+0.1
-0.2
nitrogen source
L-Asparagine (N)
+0.1
+0.2
+0.8
-0.2
-0.5
carbon source
Lactitol (C)
+0.4
+0.1
+0.3
+0.2
+0.3
carbon source
Fumarate (C)
+0.3
+0.6
+0.2
+0.2
+0.2
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