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Cofit
Protein
Homologs
Fitness for 5 genes in
Sinorhizobium meliloti 1021
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
SMa2235 and SMa2237 are separated by 289 nucleotides
SMa2237 and SMa2239 are separated by 144 nucleotides
SMa2239 and SMa2241 are separated by 35 nucleotides
SMa2241 and SMa2243 are separated by 17 nucleotides
SMa2235: SMa2235 - hypothetical protein, at 1,251,186 to 1,252,820
SMa2235
SMa2237: SMa2237 - hypothetical protein, at 1,253,110 to 1,254,114
SMa2237
SMa2239: SMa2239 - hypothetical protein, at 1,254,259 to 1,255,038
SMa2239
SMa2241: SMa2241 - hypothetical protein, at 1,255,074 to 1,256,321
SMa2241
SMa2243: SMa2243 - hypothetical protein, at 1,256,339 to 1,257,265
SMa2243
Group
Condition
SMa2235
SMa2237
SMa2239
SMa2241
SMa2243
r2a control
R2A control for volatile experiments
-0.3
-0.5
N.D.
-0.2
+0.1
volatiles
R2A-HEPES with volatiles from Trichoderma atroviridae IMI
-0.2
-0.3
N.D.
-0.0
-0.4
r2a control
R2A control for volatile experiments
-0.2
-0.3
N.D.
-0.2
-0.3
stress
copper (II) chloride 1 mM
-0.0
-0.5
N.D.
-0.3
-0.1
r2a control
R2A control for volatile experiments
-0.3
-0.2
N.D.
-0.2
-0.3
volatiles
R2A-HEPES with volatiles from Trichoderma atroviridae IMI
-0.1
-0.3
N.D.
-0.1
-0.4
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.4
-0.1
N.D.
-0.2
-0.2
stress
6-Pentyl-2H-pyran-2-one 0.4177863333 mM
-0.1
-0.3
N.D.
-0.2
-0.2
r2a-hepes control
R2A-HEPES control for volatile experiments
-0.2
-0.3
N.D.
-0.1
-0.2
stress
6-Pentyl-2H-pyran-2-one 0.385649 mM
-0.2
-0.3
N.D.
-0.2
-0.2
stress
1-octen-3-ol 0.4933903333 mM
-0.0
-0.5
N.D.
-0.1
-0.1
r2a-hepes control
R2A-HEPES control for volatile experiments
-0.1
-0.4
N.D.
-0.0
-0.3
r2a-hepes control
R2A-HEPES control for volatile experiments
-0.2
-0.2
N.D.
-0.1
-0.2
stress
6-Pentyl-2H-pyran-2-one 0.385649 mM
-0.0
-0.4
N.D.
-0.0
-0.2
stress
6-Pentyl-2H-pyran-2-one 0.4177863333 mM
-0.1
-0.2
N.D.
-0.1
-0.3
nitrogen source
NAG (N)
-0.1
-0.5
N.D.
-0.1
-0.0
volatiles
R2A-HEPES with volatiles from Trichoderma atroviridae IMI
-0.0
-0.4
N.D.
-0.1
-0.1
stress
6-Pentyl-2H-pyran-2-one 0.4177863333 mM
-0.1
+0.1
N.D.
-0.3
-0.4
nitrogen source
Cytosine (N)
-0.1
-0.5
N.D.
-0.1
+0.1
stress
6-Pentyl-2H-pyran-2-one 0.4557668333 mM
-0.1
-0.1
N.D.
+0.1
-0.3
nitrogen source
L-Asparagine (N)
+0.1
-0.4
N.D.
-0.4
+0.4
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-0.1
+0.3
N.D.
+0.0
-0.3
nitrogen source
L-Arginine (N)
-0.1
-0.5
N.D.
-0.0
+0.5
nitrogen source
nitrate (N)
+0.0
-0.3
N.D.
-0.1
+0.4
lb
LB
+0.0
-0.3
N.D.
+0.1
+0.3
stress
perchlorate 10 mM
+0.0
-0.2
N.D.
-0.1
+0.7
stress
D-Cycloserine 0.05 mg/ml
+0.0
-0.0
N.D.
-0.0
+0.6
carbon source
Lactitol (C)
-0.1
+0.3
N.D.
+0.1
+0.3
in planta
Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish)
+0.3
+0.0
N.D.
+0.5
+0.1
in planta
Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish)
+0.1
+0.1
N.D.
+0.5
+0.4
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