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Protein
Homologs
Fitness for 5 genes in
Sinorhizobium meliloti 1021
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
SMa2197 and SMa2199 are separated by 63 nucleotides
SMa2199 and SMa2201 are separated by 111 nucleotides
SMa2201 and SMa2203 are separated by 90 nucleotides
SMa2203 and SMa2205 overlap by 4 nucleotides
SMa2197: SMa2197 - ABC transporter permease, at 1,230,912 to 1,231,826
SMa2197
SMa2199: SMa2199 - ABC transporter substrate-binding protein, at 1,231,890 to 1,232,780
SMa2199
SMa2201: SMa2201 - hypothetical protein, at 1,232,892 to 1,233,272
SMa2201
SMa2203: SMa2203 - ABC transporter permease, at 1,233,363 to 1,234,157
SMa2203
SMa2205: SMa2205 - ABC transporter permease, at 1,234,154 to 1,235,014
SMa2205
Group
Condition
SMa2197
SMa2199
SMa2201
SMa2203
SMa2205
r2a control
R2A control for volatile experiments
-0.1
-0.3
-0.6
-0.3
-0.4
stress
6-Pentyl-2H-pyran-2-one 0.4557668333 mM
-0.0
-0.3
-0.2
-0.3
-0.3
r2a control
R2A control for volatile experiments
-0.3
-0.4
+0.2
-0.4
-0.2
stress
6-Pentyl-2H-pyran-2-one 0.4177863333 mM
-0.1
-0.4
-0.3
-0.1
-0.1
stress
6-Pentyl-2H-pyran-2-one 0.385649 mM
-0.2
-0.1
-0.4
-0.1
-0.1
stress
6-Pentyl-2H-pyran-2-one 0.4177863333 mM
-0.1
-0.4
-0.1
-0.2
-0.2
r2a control
R2A control for volatile experiments
-0.3
-0.2
-0.4
-0.1
-0.1
r2a-hepes control
R2A-HEPES control for volatile experiments
+0.0
-0.4
-0.4
-0.1
-0.1
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.1
-0.1
-0.6
-0.4
+0.3
r2a-hepes control
R2A-HEPES control for volatile experiments
-0.4
-0.3
+0.1
-0.1
-0.1
lb
LB
-0.3
-0.1
+0.1
-0.4
-0.1
stress
3-octanone 0.456 mM
+0.3
-0.5
-0.3
-0.2
-0.0
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant
+0.1
+0.0
-0.5
-0.0
-0.3
r2a-hepes control
R2A-HEPES control for volatile experiments
-0.2
-0.3
+0.2
-0.2
-0.1
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+0.0
+0.1
-0.7
-0.2
+0.2
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
+0.2
-0.4
+0.4
-0.3
-0.2
pH
LB, pH6
+0.0
+0.1
+0.3
-0.5
-0.3
stress
Cisplatin 0.001 mg/ml
+0.1
+0.1
-0.5
+0.1
-0.1
r2a control
R2A control for volatile experiments
-0.0
-0.3
+0.3
+0.1
-0.4
nitrogen source
L-Arginine (N)
+0.4
+0.1
-0.6
-0.0
-0.1
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.2
+0.4
-0.4
-0.1
+0.2
carbon source
Xylobiose (C)
+0.1
+0.2
-0.5
+0.1
+0.1
stress
nitrate 40 mM
+0.4
-0.2
-0.3
+0.1
+0.0
carbon source
succinate (C)
+0.2
+0.2
-0.2
-0.1
+0.1
carbon source
L-Alanine (C)
+0.1
-0.3
+0.6
-0.2
+0.3
nitrogen source
L-Leucine (N)
-0.1
+0.4
+0.6
-0.2
-0.1
carbon source
L-Alanine (C)
+0.1
-0.0
+0.5
-0.0
+0.2
nitrogen source
D-Glucosamine Hydrochloride (N)
+0.2
+0.4
-0.2
+0.1
+0.3
in planta
Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish)
+0.2
+0.6
-0.0
+0.2
+0.2
in planta
Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish)
+0.4
+0.5
+0.1
+0.1
+0.1
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