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Protein
Homologs
Fitness for 5 genes in
Sinorhizobium meliloti 1021
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
SMa2193 and SMa2195 are separated by 0 nucleotides
SMa2195 and SMa2197 are separated by 1 nucleotides
SMa2197 and SMa2199 are separated by 63 nucleotides
SMa2199 and SMa2201 are separated by 111 nucleotides
SMa2193: SMa2193 - Oxidoreductase, at 1,228,832 to 1,230,145
SMa2193
SMa2195: SMa2195 - ABC transporter ATP-binding protein, at 1,230,146 to 1,230,910
SMa2195
SMa2197: SMa2197 - ABC transporter permease, at 1,230,912 to 1,231,826
SMa2197
SMa2199: SMa2199 - ABC transporter substrate-binding protein, at 1,231,890 to 1,232,780
SMa2199
SMa2201: SMa2201 - hypothetical protein, at 1,232,892 to 1,233,272
SMa2201
Group
Condition
SMa2193
SMa2195
SMa2197
SMa2199
SMa2201
stress
6-Pentyl-2H-pyran-2-one 0.4557668333 mM
-0.4
-0.7
-0.0
-0.3
-0.2
stress
3-octanone 0.456 mM
-0.2
-0.9
+0.3
-0.5
-0.3
stress
6-Pentyl-2H-pyran-2-one 0.4177863333 mM
-0.3
-0.2
-0.1
-0.4
-0.3
r2a control
R2A control for volatile experiments
-0.1
-0.3
-0.1
-0.3
-0.6
r2a control
R2A control for volatile experiments
-0.1
-0.3
-0.3
-0.2
-0.4
lb no stress control
LB no stress control
-0.1
-0.6
-0.1
-0.0
-0.4
r2a-hepes control
R2A-HEPES control for volatile experiments
-0.3
-0.5
-0.2
-0.3
+0.1
stress
6-Pentyl-2H-pyran-2-one 0.385649 mM
-0.2
-0.9
+0.0
+0.0
-0.1
volatiles
R2A-HEPES with volatiles from Trichoderma atroviridae IMI
-0.3
-0.3
-0.2
-0.3
+0.1
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.2
-0.3
+0.0
+0.1
-0.7
r2a control
R2A control for volatile experiments
-0.3
-0.2
-0.3
-0.4
+0.2
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+0.1
-0.9
-0.2
+0.4
-0.4
r2a-hepes control
R2A-HEPES control for volatile experiments
-0.3
-0.3
-0.2
-0.3
+0.2
carbon source
D-Xylose (C)
+0.1
-0.7
+0.1
+0.0
-0.3
nitrogen source
L-Arginine (N)
-0.1
-0.3
+0.4
+0.1
-0.6
carbon source
Protocatechuic Acid (C)
+0.1
-0.7
-0.0
-0.1
+0.3
carbon source
Xylobiose (C)
+0.1
-0.3
+0.1
+0.2
-0.5
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
+0.1
-0.5
+0.2
-0.4
+0.4
nitrogen source
L-Histidine (N)
+0.1
-0.6
-0.2
+0.3
+0.2
nitrogen source
D-Glucosamine Hydrochloride (N)
-0.2
-0.4
+0.2
+0.4
-0.2
nitrogen source
Cytosine (N)
+0.1
-0.5
+0.4
-0.1
+0.1
carbon source
L-Alanine (C)
-0.2
+0.1
+0.1
-0.3
+0.6
stress
nitrate 40 mM
+0.1
+0.3
+0.4
-0.2
-0.3
nutrient
L-Histidine
+0.1
+0.4
+0.1
-0.4
+0.3
stress
Cisplatin 0.001 mg/ml
-0.0
+0.8
+0.1
+0.1
-0.5
in planta
Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish)
+0.2
-0.3
+0.2
+0.6
-0.0
stress
Chlorite 0.1 mM
+0.2
+0.6
-0.2
+0.2
-0.1
stress
Polymyxin B sulfate 0.00005 mg/ml
+0.4
+0.3
-0.1
+0.3
-0.1
nitrogen source
L-Leucine (N)
-0.0
-0.1
-0.1
+0.4
+0.6
in planta
Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish)
+0.2
+0.4
+0.4
+0.5
+0.1
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