Fitness for 5 genes in Sinorhizobium meliloti 1021

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500 ntSMa2085 and SMa2087 are separated by 296 nucleotidesSMa2087 and SMa2089 are separated by 13 nucleotidesSMa2089 and SMa2091 overlap by 10 nucleotidesSMa2091 and SMa2093 are separated by 9 nucleotides SMa2085: SMa2085 - ABC transporter permease, at 1,177,079 to 1,178,065 SMa2085 SMa2087: SMa2087 - desulfurization enzyme, at 1,178,362 to 1,179,402 SMa2087 SMa2089: SMa2089 - hypothetical protein, at 1,179,416 to 1,179,769 SMa2089 SMa2091: SMa2091 - hypothetical protein, at 1,179,760 to 1,180,647 SMa2091 SMa2093: SMa2093 - desulfurization enzyme, at 1,180,657 to 1,181,691 SMa2093
Group Condition SMa2085 SMa2087 SMa2089 SMa2091 SMa2093
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.2 +0.2 -1.0 -0.9 -0.6
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.1 -0.6 +0.1 -1.0 -0.4
stress Cisplatin 0.001 mg/ml +0.2 +0.0 -1.0 -0.5 -0.2
carbon source methyl 3-keto-a-D-glucopyranoside (C) -0.0 -0.0 -0.5 -0.9 +0.2
stress nitrate 40 mM -0.2 +0.3 -1.4 -0.3 +0.3
nitrogen source Uridine (N) -0.3 +0.2 -0.8 -0.1 -0.0
nitrogen source L-Arginine (N) -0.7 -0.2 +0.5 -0.6 +0.0
tsb Day4 TSB -0.4 -0.1 +0.5 -0.5 -0.0
nitrogen source L-Leucine (N) -0.9 -0.3 -0.5 +0.8 +0.4
stress 6-Pentyl-2H-pyran-2-one 0.4177863333 mM -0.3 -0.1 +0.5 -0.4 -0.2
carbon source L-Proline (C) +0.3 -0.1 +0.2 -0.6 -0.2
stress Chloride 200 mM -0.2 -0.1 +0.3 -0.6 +0.2
nitrogen source L-Serine (N) +0.1 +0.4 -0.4 -0.3 -0.1
stress Polymyxin B sulfate 0.00005 mg/ml +0.4 -0.3 -0.3 +0.1 -0.3
nitrogen source L-Glutamine (N) -0.3 -0.5 +0.0 +0.2 +0.3
r2a control R2A control for volatile experiments -0.2 +0.0 +0.5 -0.7 +0.0
nutrient L-Histidine -0.2 -0.5 -0.1 +0.5 +0.0
carbon source Lactulose (C) -0.4 -0.2 +0.5 +0.1 -0.2
stress Nickel (II) chloride 1 mM +0.3 +0.5 -0.3 -0.7 +0.1
stress Thallium(I) acetate 0.0025 mg/ml +0.0 +0.2 -0.5 -0.4 +0.5
nutrient L-Histidine -0.4 -0.4 +0.6 +0.1 -0.0
in planta Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish) -0.5 +0.2 +0.1 +0.4 -0.3
carbon source Mannobiose (C) +0.2 +0.1 +0.4 -0.6 -0.1
in planta Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish) -0.5 -0.0 +0.3 -0.1 +0.5
nitrogen source D-Glucosamine Hydrochloride (N) -0.1 +0.5 -0.2 -0.3 +0.4
r2a control R2A control for volatile experiments -0.4 +0.5 +0.4 -0.1 +0.0
r2a-hepes control R2A-HEPES control for volatile experiments -0.1 +0.3 +0.7 -0.4 +0.0
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.5 +0.3 +0.4 -0.2 -0.3
volatiles R2A-HEPES with volatiles from Trichoderma atroviridae IMI -0.3 +0.2 +0.4 +0.2 +0.2
stress Paraquat dichloride 0.2 mg/ml +0.1 +0.0 +0.3 +0.5 +0.4
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