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Fitness for 5 genes in
Sinorhizobium meliloti 1021
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
SMa2043 and SMa2045 are separated by 65 nucleotides
SMa2045 and SMa2047 are separated by 190 nucleotides
SMa2047 and SMa2049 are separated by 250 nucleotides
SMa2049 and SMa2051 are separated by 179 nucleotides
SMa2043: SMa2043 - TRm2011-2a transposase, at 1,156,137 to 1,156,547
SMa2043
SMa2045: SMa2045 - TRm2011-2b transposase, at 1,156,613 to 1,157,086
SMa2045
SMa2047: SMa2047 - TRm24 transposase, at 1,157,277 to 1,158,278
SMa2047
SMa2049: SMa2049 - LacI family transcriptional regulator, at 1,158,529 to 1,159,611
SMa2049
SMa2051: SMa2051 - desaturase, at 1,159,791 to 1,160,825
SMa2051
Group
Condition
SMa2043
SMa2045
SMa2047
SMa2049
SMa2051
stress
Cisplatin 0.0005 mg/ml
N.D.
N.D.
N.D.
-0.3
-0.2
volatiles
R2A-HEPES with volatiles from Trichoderma atroviridae IMI
N.D.
N.D.
N.D.
-0.2
-0.3
nitrogen source
L-Leucine (N)
N.D.
N.D.
N.D.
-0.2
-0.3
agar plate interaction control
Parafilmed volatile agar plate with no fungus
N.D.
N.D.
N.D.
-0.2
-0.2
nitrogen source
L-Arginine (N)
N.D.
N.D.
N.D.
-0.5
+0.1
stress
1-octen-3-ol 0.6030326667 mM
N.D.
N.D.
N.D.
-0.1
-0.3
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
N.D.
N.D.
N.D.
-0.1
-0.3
r2a-hepes control
R2A-HEPES control for volatile experiments
N.D.
N.D.
N.D.
-0.1
-0.3
nitrogen source
L-Asparagine (N)
N.D.
N.D.
N.D.
+0.0
-0.3
r2a-hepes control
R2A-HEPES control for volatile experiments
N.D.
N.D.
N.D.
-0.1
-0.2
volatiles
R2A-HEPES with volatiles from Trichoderma atroviridae IMI
N.D.
N.D.
N.D.
-0.0
-0.3
carbon source
Protocatechuic Acid (C)
N.D.
N.D.
N.D.
+0.0
-0.4
agar plate interaction control
Parafilmed volatile agar plate with no fungus
N.D.
N.D.
N.D.
-0.2
-0.1
agar plate interaction control
Parafilmed volatile agar plate with no fungus
N.D.
N.D.
N.D.
+0.2
-0.5
volatiles
R2A-HEPES with volatiles from Trichoderma atroviridae IMI
N.D.
N.D.
N.D.
+0.1
-0.2
stress
3-octanone 2.655166667 mM
N.D.
N.D.
N.D.
+0.1
-0.2
volatiles
R2A-HEPES with volatiles from Trichoderma atroviridae IMI
N.D.
N.D.
N.D.
+0.2
-0.2
stress
Aluminum chloride
N.D.
N.D.
N.D.
-0.2
+0.2
stress
Cisplatin 0.001 mg/ml
N.D.
N.D.
N.D.
-0.2
+0.2
stress
3-octanone 0.456 mM
N.D.
N.D.
N.D.
+0.2
-0.1
nitrogen source
D-Glucosamine Hydrochloride (N)
N.D.
N.D.
N.D.
+0.3
-0.1
stress
nitrate 40 mM
N.D.
N.D.
N.D.
-0.0
+0.3
stress
D-Cycloserine 0.05 mg/ml
N.D.
N.D.
N.D.
+0.1
+0.2
carbon source
D-Leucrose (C)
N.D.
N.D.
N.D.
+0.1
+0.2
carbon source
acetate (C)
N.D.
N.D.
N.D.
+0.2
+0.2
stress
3-octanone 2.655166667 mM
N.D.
N.D.
N.D.
+0.2
+0.1
carbon source
D-Salicin (C)
N.D.
N.D.
N.D.
+0.1
+0.3
stress
6-Pentyl-2H-pyran-2-one 0.4177863333 mM
N.D.
N.D.
N.D.
+0.2
+0.2
nitrogen source
nitrate (N)
N.D.
N.D.
N.D.
+0.1
+0.4
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
N.D.
N.D.
N.D.
+0.2
+0.4
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