Fitness for 5 genes in Sinorhizobium meliloti 1021

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500 ntSMa2014 and SMa2015 overlap by 56 nucleotidesSMa2015 and SMa2019 are separated by 785 nucleotidesSMa2019 and SMa2020 are separated by 14 nucleotidesSMa2020 and SMa2023 are separated by 144 nucleotides SMa2014: SMa2014 - transcriptional regulator, at 1,141,504 to 1,141,941 SMa2014 SMa2015: SMa2015 - transcriptional regulator, at 1,141,886 to 1,142,407 SMa2015 SMa2019: SMa2019 - oxidoreductase, at 1,143,193 to 1,143,603 SMa2019 SMa2020: SMa2020 - Transcriptional regulator, at 1,143,618 to 1,144,085 SMa2020 SMa2023: SMa2023 - hypothetical protein, at 1,144,230 to 1,145,021 SMa2023
Group Condition SMa2014 SMa2015 SMa2019 SMa2020 SMa2023
carbon source methyl 3-keto-a-D-glucopyranoside (C) +0.0 -0.3 N.D. -2.3 -0.5
carbon source L-Histidine (C) +0.1 -0.4 N.D. -2.4 -0.2
carbon source L-Proline (C) -0.1 -0.2 N.D. -2.1 -0.1
carbon source L-Lysine (C) -0.0 -0.0 N.D. -2.1 -0.3
carbon source pipercolic (C) +0.3 -0.1 N.D. -2.2 -0.4
carbon source L-Lysine (C) -0.1 -0.1 N.D. -2.0 -0.1
pH LB, pH6 -0.7 -0.4 N.D. -0.3 -0.9
carbon source L-Glutamine (C) -0.3 -0.0 N.D. -1.5 -0.4
carbon source pipercolic (C) +0.0 -0.2 N.D. -2.1 +0.1
carbon source Myristic (C) +0.1 -0.2 N.D. -2.3 +0.3
carbon source methyl 3-keto-a-D-glucopyranoside (C) +0.2 -0.0 N.D. -2.2 -0.1
carbon source D-Arabinose (C) +0.3 +0.1 N.D. -2.3 +0.1
nitrogen source nitrate (N) -0.2 -0.4 N.D. -1.4 +0.4
carbon source 5-Aminovaleric (C) +0.1 -0.1 N.D. -1.9 +0.2
carbon source methyl-beta-D-xylopyranoside (C) +0.3 -0.2 N.D. -1.4 -0.3
carbon source L-Lysine (C) +0.2 -0.2 N.D. -1.8 +0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.5 +0.0 N.D. -1.2 -0.7
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.7 -0.2 N.D. -1.1 -0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.2 -0.1 N.D. -1.2 +0.7
stress Sisomicin 0.004 mg/ml +0.3 -0.3 N.D. +1.5 -0.0
stress D-Cycloserine 0.05 mg/ml -0.1 -0.1 N.D. +2.3 -0.1
stress Cobalt chloride 0.16 mM +0.1 +0.1 N.D. +2.6 -0.1
stress Paraquat dichloride 0.05 mg/ml -0.1 +0.0 N.D. +2.6 +0.3
stress Paraquat dichloride 0.2 mg/ml +0.1 -0.2 N.D. +2.9 +0.3
pH LB, pH8 -0.5 +0.2 N.D. +4.0 -0.4
pH LB, pH8 -0.1 -0.0 N.D. +4.0 -0.1
lb LB -0.1 -0.0 N.D. +3.9 +0.3
lb LB -0.1 +0.0 N.D. +4.0 +0.5
stress perchlorate 10 mM +0.1 +0.3 N.D. +4.4 -0.3
lb LB +0.1 -0.1 N.D. +4.7 +0.3
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