Fitness for 5 genes in Sinorhizobium meliloti 1021

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500 ntSMa2002 and SMa2004 are separated by 59 nucleotidesSMa2004 and SMa2008 are separated by 464 nucleotidesSMa2008 and SMa2009 are separated by 54 nucleotidesSMa2009 and SMa2011 overlap by 4 nucleotides SMa2002: SMa2002 - hydrolase, at 1,135,285 to 1,135,947 SMa2002 SMa2004: SMa2004 - ROK family transcriptional regulator, at 1,136,007 to 1,137,080 SMa2004 SMa2008: SMa2008 - transcriptional regulator, at 1,137,545 to 1,138,150 SMa2008 SMa2009: SMa2009 - hypothetical protein, at 1,138,205 to 1,138,654 SMa2009 SMa2011: SMa2011 - hypothetical protein, at 1,138,651 to 1,138,977 SMa2011
Group Condition SMa2002 SMa2004 SMa2008 SMa2009 SMa2011
carbon source methyl 3-keto-a-D-glucopyranoside (C) -0.2 -0.4 -0.4 -0.3 -0.6
stress Polymyxin B sulfate 0.00005 mg/ml -0.3 -0.4 +0.0 -1.1 +0.1
stress Aluminum chloride -0.5 +0.1 -0.4 -0.5 -0.2
r2a control R2A control for volatile experiments +0.0 -0.0 -0.3 -0.6 -0.6
nitrogen source L-Asparagine (N) +0.0 -0.3 -0.4 -0.2 -0.4
carbon source Beta-Lactose (C) +0.2 -0.3 -0.0 -0.6 -0.4
nitrogen source L-Arginine (N) -0.4 -1.0 +0.1 +0.3 -0.1
stress Cisplatin 0.0005 mg/ml +0.2 -0.3 -0.2 -0.5 -0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.4 +0.2 +0.0 -0.3 -0.6
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.1 +0.4 -0.2 -0.5 -0.8
carbon source L-Arabinose (C) -0.1 +0.2 -0.2 -0.5 -0.4
r2a-hepes control R2A-HEPES control for volatile experiments -0.2 -0.2 -0.1 +0.3 -0.5
nitrogen source L-Histidine (N) -0.5 -0.1 -0.4 +0.4 -0.1
carbon source methyl 3-keto-a-D-glucopyranoside (C) -0.1 -0.4 -0.2 -0.5 +0.6
carbon source D-Raffinose (C) -0.2 -0.2 +0.4 -0.3 -0.3
r2a control R2A control for volatile experiments -0.1 +0.3 -0.4 +0.1 -0.5
stress 1-octen-3-ol 0.5427293333 mM -0.5 +0.2 +0.1 +0.1 -0.6
carbon source Lactulose (C) +0.4 -0.5 -0.2 -0.4 +0.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.3 -0.3 +0.5 -0.4 +0.1
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.5 +0.0 -0.4 -0.1 -0.5
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.1 +0.1 +0.3 +0.3 -1.0
nitrogen source NAG (N) +0.1 -0.5 -0.3 +0.2 +0.3
carbon source Lactitol (C) +0.4 -0.5 +0.0 -0.3 +0.3
stress Fusidic 0.0001 mg/ml -0.2 +0.0 +0.1 -0.6 +0.6
stress Cisplatin 0.001 mg/ml -0.4 -0.3 -0.0 +0.2 +0.7
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.1 +0.2 +0.6 +0.2 -0.7
stress Chlorite 0.1 mM -0.3 -0.0 +0.4 +0.1 +0.5
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.4 +0.1 +0.9 +0.3 -0.6
nitrogen source L-Leucine (N) +0.1 -0.1 +0.3 +0.2 +0.7
in planta Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish) +0.1 +0.4 +0.3 +0.1 +0.4
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