Fitness for 5 genes in Sinorhizobium meliloti 1021

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500 ntSMa1990 and SMa1993 are separated by 372 nucleotidesSMa1993 and SMa1995 are separated by 29 nucleotidesSMa1995 and SMa1996 are separated by 2 nucleotidesSMa1996 and SMa1998 are separated by 16 nucleotides SMa1990: SMa1990 - hypothetical protein, at 1,129,048 to 1,129,404 SMa1990 SMa1993: SMa1993 - hydrolase, at 1,129,777 to 1,130,433 SMa1993 SMa1995: SMa1995 - ABC transporter permease, at 1,130,463 to 1,131,413 SMa1995 SMa1996: SMa1996 - ABC transporter permease, at 1,131,416 to 1,132,387 SMa1996 SMa1998: SMa1998 - ABC transporter ATP-binding protein, at 1,132,404 to 1,133,897 SMa1998
Group Condition SMa1990 SMa1993 SMa1995 SMa1996 SMa1998
agar plate interaction control Parafilmed volatile agar plate with no fungus N.D. -0.2 -0.2 +0.2 -1.0
stress copper (II) chloride 1 mM N.D. -0.9 +0.3 -0.8 +0.1
nitrogen source L-Arginine (N) N.D. -1.1 +0.0 +0.1 -0.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI N.D. +0.0 -0.5 -0.6 -0.1
stress Paraquat dichloride 0.2 mg/ml N.D. -0.3 -0.0 -0.0 -0.8
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI N.D. -0.4 -0.4 -0.0 -0.3
stress Polymyxin B sulfate 0.00005 mg/ml N.D. -0.3 -0.5 -0.5 +0.3
carbon source D-Glucose (C) N.D. -0.4 -0.3 +0.0 -0.3
stress Cisplatin 0.001 mg/ml N.D. -0.3 -0.4 -0.3 -0.0
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant N.D. -0.2 -0.6 +0.3 -0.3
in planta Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish) N.D. +0.4 -0.6 -0.5 -0.0
stress Chlorite 0.1 mM N.D. -0.1 -0.2 +0.3 -0.6
nitrogen source L-Histidine (N) N.D. -0.8 +0.2 +0.1 -0.1
agar plate interaction control Parafilmed volatile agar plate with no fungus N.D. +0.1 -1.1 +0.5 +0.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI N.D. +0.0 -0.4 +0.2 -0.3
pH LB, pH6 N.D. +0.1 +0.3 -0.2 -0.5
carbon source acetate (C) N.D. -0.3 -0.5 +0.2 +0.3
agar plate interaction control Parafilmed volatile agar plate with no fungus N.D. -0.3 +0.2 +0.1 -0.3
agar plate interaction control Parafilmed volatile agar plate with no fungus N.D. +0.1 -0.0 +0.3 -0.6
carbon source D-Mannose (C) N.D. -0.2 -0.4 +0.0 +0.4
nitrogen source Cytosine (N) N.D. +0.2 -0.1 -0.3 +0.3
nitrogen source Uridine (N) N.D. -0.1 -0.3 +0.4 +0.2
r2a control R2A control for volatile experiments N.D. +0.3 -0.0 +0.2 -0.4
dmso control DMSO control N.D. +0.2 +0.3 -0.4 +0.1
volatiles R2A-HEPES with volatiles from Trichoderma atroviridae IMI N.D. +0.2 +0.2 -0.4 +0.3
carbon source succinate (C) N.D. -0.3 +0.3 +0.1 +0.3
volatiles R2A-HEPES with volatiles from Trichoderma atroviridae IMI N.D. +0.4 +0.1 +0.2 -0.3
carbon source Xylobiose (C) N.D. +0.1 +0.3 +0.3 -0.2
temperature LB, 23C N.D. +0.2 +0.3 +0.3 +0.2
temperature LB, 30C N.D. +0.3 +0.3 +0.1 +0.4
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