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Protein
Homologs
Fitness for 5 genes in
Sinorhizobium meliloti 1021
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
SMa1969 and SMa1971 are separated by 129 nucleotides
SMa1971 and SMa1973 are separated by 13 nucleotides
SMa1973 and SMa1974 overlap by 1 nucleotides
SMa1974 and SMa1976 are separated by 180 nucleotides
SMa1969: SMa1969 - amidotransferase, at 1,120,845 to 1,121,684
SMa1969
SMa1971: SMa1971 - hypothetical protein, at 1,121,814 to 1,122,110
SMa1971
SMa1973: SMa1973 - hypothetical protein, at 1,122,124 to 1,122,483
SMa1973
SMa1974: SMa1974 - hypothetical protein, at 1,122,483 to 1,123,199
SMa1974
SMa1976: SMa1976 - hypothetical protein, at 1,123,380 to 1,124,171
SMa1976
Group
Condition
SMa1969
SMa1971
SMa1973
SMa1974
SMa1976
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-0.3
-0.4
-0.5
-0.1
-0.8
in planta
Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish)
-0.1
-0.4
-0.7
-0.1
-0.4
nitrogen source
L-Asparagine (N)
-0.5
-0.3
-0.2
-0.4
-0.3
stress
Chlorite 0.1 mM
+0.1
+0.1
-0.4
-0.9
-0.5
in planta
Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish)
-0.4
-0.3
-0.9
+0.0
+0.0
pH
LB, pH6
-0.4
-0.3
-0.5
-0.4
+0.1
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant
-0.5
-0.0
-0.6
-0.2
+0.1
stress
Sisomicin 0.004 mg/ml
+0.3
-0.4
-0.6
+0.0
-0.4
stress
Cisplatin 0.001 mg/ml
-0.5
-0.6
+0.1
-0.1
+0.3
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.6
+0.1
+0.1
+0.1
-0.3
carbon source
Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C)
+0.2
-0.3
-0.3
-0.3
+0.1
nitrogen source
L-Leucine (N)
+0.0
+0.3
+0.0
-0.8
-0.0
nitrogen source
Uridine (N)
-0.5
-0.2
-0.1
+0.2
+0.1
stress
Cisplatin 0.0005 mg/ml
-0.4
-0.1
+0.0
+0.3
-0.3
r2a control
R2A control for volatile experiments
+0.1
-0.2
-0.5
+0.3
-0.1
stress
Nickel (II) chloride 1 mM
-0.5
+0.2
+0.2
-0.2
-0.1
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
+0.2
-0.3
+0.2
-0.0
-0.3
stress
Paraquat dichloride 0.3 mg/ml
+0.2
-0.1
-0.5
+0.4
-0.2
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.7
+0.0
+0.4
+0.3
+0.1
stress
perchlorate 10 mM
-0.1
+0.1
-0.6
+0.3
+0.5
carbon source
Myristic (C)
+0.1
-0.4
+0.4
-0.1
+0.2
stress
Aluminum chloride
+0.6
-0.5
-0.1
-0.1
+0.4
carbon source
Protocatechuic Acid (C)
+0.3
-0.4
+0.4
-0.0
+0.1
stress
Paraquat dichloride 0.2 mg/ml
+0.0
-0.2
+0.6
+0.2
-0.2
carbon source
L-Lysine (C)
+0.0
-0.1
+0.8
-0.1
-0.1
carbon source
D-Mannose (C)
+0.1
+0.1
+0.4
-0.3
+0.2
carbon source
Xylobiose (C)
+0.2
-0.2
+0.4
+0.3
+0.0
stress
Polymyxin B sulfate 0.00005 mg/ml
+0.5
+0.0
-0.3
+0.5
+0.1
lb no stress control
LB no stress control
+0.2
+0.2
+0.4
+0.1
+0.2
carbon source
Myristic (C)
+0.2
+0.1
+0.4
+0.2
+0.2
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