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Protein
Homologs
Fitness for 5 genes in
Sinorhizobium meliloti 1021
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
SMa1968 and SMa1969 are separated by 76 nucleotides
SMa1969 and SMa1971 are separated by 129 nucleotides
SMa1971 and SMa1973 are separated by 13 nucleotides
SMa1973 and SMa1974 overlap by 1 nucleotides
SMa1968: SMa1968 - amidotransferase, at 1,120,076 to 1,120,768
SMa1968
SMa1969: SMa1969 - amidotransferase, at 1,120,845 to 1,121,684
SMa1969
SMa1971: SMa1971 - hypothetical protein, at 1,121,814 to 1,122,110
SMa1971
SMa1973: SMa1973 - hypothetical protein, at 1,122,124 to 1,122,483
SMa1973
SMa1974: SMa1974 - hypothetical protein, at 1,122,483 to 1,123,199
SMa1974
Group
Condition
SMa1968
SMa1969
SMa1971
SMa1973
SMa1974
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant
-0.1
-0.5
-0.0
-0.6
-0.2
stress
Chlorite 0.1 mM
-0.4
+0.1
+0.1
-0.4
-0.9
in planta
Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish)
+0.1
-0.4
-0.3
-0.9
+0.0
stress
Cisplatin 0.001 mg/ml
-0.2
-0.5
-0.6
+0.1
-0.1
pH
LB, pH6
+0.2
-0.4
-0.3
-0.5
-0.4
nitrogen source
L-Asparagine (N)
+0.1
-0.5
-0.3
-0.2
-0.4
carbon source
Methyl beta-D-glucopyranoside (C)
-1.0
+0.0
+0.0
-0.2
-0.2
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
+0.1
-0.3
-0.4
-0.5
-0.1
carbon source
Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C)
-0.4
+0.2
-0.3
-0.3
-0.3
lb
LB
-0.7
-0.3
+0.1
-0.2
-0.0
in planta
Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish)
+0.4
-0.1
-0.4
-0.7
-0.1
stress
Sisomicin 0.004 mg/ml
-0.2
+0.3
-0.4
-0.6
+0.0
stress
perchlorate 10 mM
-0.6
-0.1
+0.1
-0.6
+0.3
nitrogen source
L-Leucine (N)
-0.3
+0.0
+0.3
+0.0
-0.8
stress
Aluminum chloride
-0.6
+0.6
-0.5
-0.1
-0.1
nitrogen source
NAG (N)
-0.3
+0.0
-0.3
+0.3
-0.3
stress
Nickel (II) chloride 1 mM
-0.2
-0.5
+0.2
+0.2
-0.2
stress
Polymyxin B sulfate 0.00005 mg/ml
-1.1
+0.5
+0.0
-0.3
+0.5
nitrogen source
Uridine (N)
+0.3
-0.5
-0.2
-0.1
+0.2
carbon source
methyl 3-keto-a-D-glucopyranoside (C)
-0.5
+0.2
-0.3
+0.3
+0.2
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+0.4
-0.3
-0.3
-0.1
+0.2
stress
Paraquat dichloride 0.3 mg/ml
-0.1
+0.2
-0.1
-0.5
+0.4
r2a control
R2A control for volatile experiments
+0.3
+0.1
-0.2
-0.5
+0.3
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+0.2
-0.7
+0.0
+0.4
+0.3
carbon source
Protocatechuic Acid (C)
+0.2
+0.3
-0.4
+0.4
-0.0
carbon source
succinate (C)
+0.4
-0.2
-0.2
+0.4
+0.1
carbon source
D-Ribose (C)
+0.2
-0.3
+0.3
+0.4
+0.0
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+1.1
-0.6
+0.1
+0.1
+0.1
carbon source
L-Lysine (C)
+0.3
+0.0
-0.1
+0.8
-0.1
lb no stress control
LB no stress control
+0.4
+0.2
+0.2
+0.4
+0.1
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