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Protein
Homologs
Fitness for 5 genes in
Sinorhizobium meliloti 1021
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
SMa1933 and SMa1935 are separated by 154 nucleotides
SMa1935 and SMa1937 overlap by 4 nucleotides
SMa1937 and SMa1939 are separated by 175 nucleotides
SMa1939 and SMa1943 are separated by 545 nucleotides
SMa1933: SMa1933 - LysR family transcriptional regulator, at 1,098,786 to 1,099,427
SMa1933
SMa1935: SMa1935 - TrpR binding protein WrbA, at 1,099,582 to 1,100,220
SMa1935
SMa1937: SMa1937 - hypothetical protein, at 1,100,217 to 1,101,455
SMa1937
SMa1939: SMa1939 - hypothetical protein, at 1,101,631 to 1,103,166
SMa1939
SMa1943: SMa1943 - transcriptional regulator, at 1,103,712 to 1,104,167
SMa1943
Group
Condition
SMa1933
SMa1935
SMa1937
SMa1939
SMa1943
nitrogen source
L-Asparagine (N)
-3.5
+0.3
+0.5
+0.2
-0.5
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-2.6
-0.3
+0.3
-0.2
-0.0
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+0.2
-1.6
-0.6
-0.1
-0.1
stress
Thallium(I) acetate 0.001 mg/ml
-1.0
-0.4
+0.0
+0.1
-0.4
nitrogen source
NAG (N)
-0.3
-0.3
-0.3
-0.1
-0.4
nitrogen source
Uridine (N)
-0.9
-0.1
-0.4
+0.2
-0.0
stress
perchlorate 10 mM
-0.3
-0.5
-0.4
+0.3
-0.3
stress
Chlorite 0.1 mM
-0.8
+0.2
-0.3
+0.4
-0.4
nitrogen source
L-Histidine (N)
-0.3
+0.1
+0.2
+0.2
-1.2
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.6
-0.3
-0.4
+0.1
+0.2
stress
Cisplatin 0.0005 mg/ml
+0.4
-0.4
-0.2
-0.0
-0.8
nitrogen source
L-Leucine (N)
-0.9
+0.2
-0.3
+0.2
+0.1
carbon source
D-Fructose (C)
-0.7
+0.3
-0.2
+0.1
-0.1
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-1.2
+0.3
+0.2
+0.1
+0.0
carbon source
palatinose (C)
-0.7
-0.2
-0.1
+0.3
+0.3
stress
copper (II) chloride 1 mM
-0.9
+0.2
+0.2
-0.1
+0.1
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.1
+0.6
-0.1
-0.0
-0.7
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+0.7
+0.0
-0.3
-0.3
-0.3
nutrient
L-Histidine
-0.4
+0.7
-0.0
+0.1
-0.5
nitrogen source
L-Serine (N)
+0.3
+0.1
-0.3
+0.3
-0.4
stress
D-Cycloserine 0.05 mg/ml
+0.4
-0.5
-0.0
-0.1
+0.4
nitrogen source
Cytosine (N)
+0.2
-0.4
-0.1
+0.1
+0.7
carbon source
Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C)
+0.7
-0.2
+0.1
+0.2
-0.3
carbon source
5-Aminovaleric (C)
+0.5
+0.2
-0.1
-0.2
+0.4
stress
6-Pentyl-2H-pyran-2-one 0.385649 mM
+0.9
+0.1
+0.2
+0.0
-0.4
carbon source
L-Alanine (C)
+1.0
+0.0
-0.1
-0.0
+0.3
carbon source
Myristic (C)
+0.8
+0.3
-0.1
+0.0
+0.3
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant
-0.1
+0.8
+0.1
-0.0
+0.6
carbon source
L-Arabinose (C)
+0.8
+0.1
+0.1
+0.1
+0.3
stress
Polymyxin B sulfate 0.00005 mg/ml
+0.9
+0.0
+0.3
+0.4
+0.0
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