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Protein
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Fitness for 5 genes in
Sinorhizobium meliloti 1021
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
SMa1905 and SMa1907 are separated by 658 nucleotides
SMa1907 and SMa1910 are separated by 1073 nucleotides
SMa1910 and SMa1913 are separated by 342 nucleotides
SMa1913 and SMa1916 are separated by 159 nucleotides
SMa1905: SMa1905 - MrcB penicillin binding protein B, at 1,082,806 to 1,085,151
SMa1905
SMa1907: SMa1907 - hypothetical protein, at 1,085,810 to 1,086,190
SMa1907
SMa1910: SMa1910 - hypothetical protein, at 1,087,264 to 1,087,539
SMa1910
SMa1913: SMa1913 - Na+/H+ antiporter, at 1,087,882 to 1,089,270
SMa1913
SMa1916: SMa1916 - Permease, at 1,089,430 to 1,091,208
SMa1916
Group
Condition
SMa1905
SMa1907
SMa1910
SMa1913
SMa1916
r2a control
R2A control for volatile experiments
-0.4
-0.8
-0.4
-0.4
-0.0
dmso control
DMSO control
-0.1
-1.3
+0.0
-0.4
+0.0
volatiles
R2A-HEPES with volatiles from Trichoderma atroviridae IMI
-0.1
-0.5
-0.6
-0.4
-0.1
r2a-hepes control
R2A-HEPES control for volatile experiments
-0.3
-0.4
-0.2
-0.3
-0.0
r2a control
R2A control for volatile experiments
-0.2
-0.4
-0.1
-0.5
+0.0
nitrogen source
L-Asparagine (N)
+0.1
-0.3
-1.4
+0.5
+0.0
stress
6-Pentyl-2H-pyran-2-one 0.4557668333 mM
-0.1
-0.7
+0.1
-0.2
-0.0
carbon source
Methyl beta-D-glucopyranoside (C)
-0.2
-0.6
-0.2
+0.2
-0.0
lb no stress control
LB no stress control
+0.1
-0.9
+0.3
-0.2
-0.0
stress
3-octanone 5.310333333 mM
+0.0
-0.8
+0.1
-0.2
+0.2
stress
Nickel (II) chloride 1 mM
+0.2
-0.5
-0.5
+0.3
-0.0
stress
1-octen-3-ol 0.4933903333 mM
-0.1
-0.6
+0.2
-0.2
+0.2
r2a-hepes control
R2A-HEPES control for volatile experiments
-0.4
-0.3
+0.5
-0.2
-0.2
stress
6-Pentyl-2H-pyran-2-one 0.385649 mM
+0.1
-0.6
+0.2
-0.4
+0.2
volatiles
R2A-HEPES with volatiles from Trichoderma atroviridae IMI
-0.2
-0.6
+0.3
-0.1
+0.0
stress
Thallium(I) acetate 0.001 mg/ml
-0.1
-0.1
-0.5
+0.4
+0.1
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-0.5
-0.0
+0.3
+0.2
-0.2
carbon source
methyl 3-keto-a-D-glucopyranoside (C)
-0.1
-0.8
+0.4
+0.2
+0.0
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.1
+0.0
+0.2
-0.5
+0.3
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-0.2
-0.4
+0.4
+0.3
+0.1
carbon source
acetate (C)
-0.0
-0.3
+0.3
+0.5
-0.1
in planta
Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish)
+0.3
-0.2
+0.5
+0.2
-0.1
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.1
-0.2
+0.4
+0.3
+0.2
nitrogen source
L-Glutamine (N)
+0.2
+0.6
+0.0
+0.1
-0.2
stress
Paraquat dichloride 0.2 mg/ml
+0.2
+0.4
-0.5
+0.6
+0.0
stress
Polymyxin B sulfate 0.00005 mg/ml
+0.3
-0.5
+1.0
+0.1
+0.1
nitrogen source
L-Arginine (N)
+0.2
+0.8
-0.3
+0.5
-0.1
carbon source
D-Glucose (C)
-0.1
+0.4
+0.6
+0.3
-0.1
stress
Aluminum chloride
+0.1
+0.4
+0.5
-0.0
+0.2
nitrogen source
L-Leucine (N)
+0.0
+0.5
+0.3
+0.6
+0.1
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