Fitness for 5 genes in Sinorhizobium meliloti 1021

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 243 experiments or choose conditions or try the comparative fitness browser

500 ntSMa1884 and SMa1885 overlap by 4 nucleotidesSMa1885 and SMa1887 are separated by 65 nucleotidesSMa1887 and SMa1890 are separated by 96 nucleotidesSMa1890 and SMa1891 overlap by 83 nucleotides SMa1884: SMa1884 - Cation/multidrug efflux protein, at 1,069,938 to 1,073,048 SMa1884 SMa1885: SMa1885 - membrane efflux protein, at 1,073,045 to 1,074,193 SMa1885 SMa1887: SMa1887 - transcriptional regulator, at 1,074,259 to 1,074,861 SMa1887 SMa1890: SMa1890 - oxidoreductase, at 1,074,958 to 1,075,602 SMa1890 SMa1891: SMa1891 - thioredoxin reductase, at 1,075,520 to 1,075,816 SMa1891
Group Condition SMa1884 SMa1885 SMa1887 SMa1890 SMa1891
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.0 +0.1 N.D. -0.8 N.D.
stress copper (II) chloride 1 mM -0.1 -0.0 N.D. -0.5 N.D.
stress Aluminum chloride -0.2 -0.3 N.D. -0.1 N.D.
stress nitrate 40 mM -0.0 -0.3 N.D. -0.3 N.D.
nitrogen source L-Histidine (N) -0.3 -0.3 N.D. +0.0 N.D.
in planta Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish) -0.2 -0.0 N.D. -0.4 N.D.
stress 6-Pentyl-2H-pyran-2-one 0.385649 mM +0.0 -0.0 N.D. -0.6 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.0 -0.5 N.D. -0.2 N.D.
in planta Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish) -0.1 -0.3 N.D. -0.2 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.1 +0.2 N.D. -0.5 N.D.
dmso control DMSO control -0.0 +0.2 N.D. -0.5 N.D.
carbon source Sucrose (C) -0.1 +0.2 N.D. -0.5 N.D.
nitrogen source L-Arginine (N) -0.3 -0.3 N.D. +0.2 N.D.
nitrogen source Gly-DL-Asp (N) -0.1 -0.4 N.D. +0.2 N.D.
stress 1-octen-3-ol 0.4933903333 mM +0.1 +0.2 N.D. -0.5 N.D.
nitrogen source NAG (N) +0.1 -0.4 N.D. +0.2 N.D.
nutrient L-Lysine -0.1 -0.3 N.D. +0.2 N.D.
nitrogen source L-Asparagine (N) -0.2 -0.4 N.D. +0.4 N.D.
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.3 -0.0 N.D. -0.3 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.4 +0.2 N.D. +0.2 N.D.
r2a-hepes control R2A-HEPES control for volatile experiments +0.1 +0.3 N.D. -0.3 N.D.
nitrogen source L-Serine (N) -0.1 -0.2 N.D. +0.4 N.D.
r2a-hepes control R2A-HEPES control for volatile experiments +0.2 +0.2 N.D. -0.3 N.D.
dmso control DMSO control +0.1 +0.3 N.D. -0.2 N.D.
stress 6-Pentyl-2H-pyran-2-one 0.385649 mM +0.3 +0.2 N.D. -0.1 N.D.
nitrogen source L-Leucine (N) -0.1 +0.0 N.D. +0.4 N.D.
r2a control R2A control for volatile experiments +0.2 +0.4 N.D. -0.2 N.D.
stress 6-Pentyl-2H-pyran-2-one 0.4177863333 mM -0.1 +0.2 N.D. +0.4 N.D.
lb no stress control LB no stress control +0.2 +0.1 N.D. +0.3 N.D.
nitrogen source D-Glucosamine Hydrochloride (N) +0.0 -0.1 N.D. +0.8 N.D.
remove
SMa1884
plot		 remove
SMa1885
plot		 remove
SMa1887		 remove
SMa1890
plot		 remove
SMa1891
plot