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Cofit
Protein
Homologs
Fitness for 5 genes in
Sinorhizobium meliloti 1021
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
SMa1833 and SMa1835 are separated by 189 nucleotides
SMa1835 and SMa1836 are separated by 310 nucleotides
SMa1836 and SMa1838 are separated by 11 nucleotides
SMa1838 and SMa1840 are separated by 89 nucleotides
SMa1833: SMa1833 - hypothetical protein, at 1,039,508 to 1,040,893
SMa1833
SMa1835: SMa1835 - hypothetical protein, at 1,041,083 to 1,041,991
SMa1835
SMa1836: SMa1836 - acetylornithine deacetylase, at 1,042,302 to 1,043,426
SMa1836
SMa1838: SMa1838 - dehydrogenase, at 1,043,438 to 1,044,361
SMa1838
SMa1840: SMa1840 - hypothetical protein, at 1,044,451 to 1,044,804
SMa1840
Group
Condition
SMa1833
SMa1835
SMa1836
SMa1838
SMa1840
stress
perchlorate 10 mM
-0.0
+0.7
-0.3
-1.7
-0.6
nitrogen source
L-Asparagine (N)
-0.0
+0.3
-0.4
-1.0
-0.7
stress
6-Pentyl-2H-pyran-2-one 0.4557668333 mM
-0.4
-0.3
-0.1
-0.9
+0.1
dmso control
DMSO control
-0.1
-0.3
-0.1
-0.8
-0.2
stress
Aluminum chloride
+0.1
-0.2
-0.0
-1.1
-0.3
nitrogen source
L-Leucine (N)
+0.2
-0.2
-0.1
-0.7
-0.4
dmso control
DMSO control
+0.0
-0.5
-0.0
-0.6
-0.2
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+0.2
-0.0
-0.2
-0.6
-0.6
stress
6-Pentyl-2H-pyran-2-one 0.4557668333 mM
-0.2
-0.3
-0.1
-0.4
-0.2
stress
6-Pentyl-2H-pyran-2-one 0.4177863333 mM
-0.2
-0.3
-0.0
-0.7
+0.1
carbon source
D-Mannose (C)
-0.2
+0.2
-0.2
-0.4
-0.4
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
+0.1
+0.3
+0.1
-1.1
-0.4
stress
Thallium(I) acetate 0.0025 mg/ml
-0.1
+0.2
+0.1
-0.7
-0.5
nitrogen source
Cytosine (N)
-0.3
-0.2
+0.2
-0.0
-0.5
stress
copper (II) chloride 1 mM
+0.1
+0.2
-0.1
-1.1
-0.1
stress
Paraquat dichloride 0.2 mg/ml
-0.2
+0.3
+0.0
-0.4
-0.4
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+0.4
+0.1
+0.3
-1.9
+0.4
stress
3-octanone 0.456 mM
+0.1
+0.0
+0.1
-1.0
+0.2
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
+0.1
+0.3
-0.1
-0.2
-0.7
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
+0.3
+0.2
-0.0
-0.5
-0.6
stress
6-Pentyl-2H-pyran-2-one 0.385649 mM
-0.3
-0.2
-0.0
-0.4
+0.3
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+0.0
+0.4
-0.3
-0.7
+0.0
stress
Cisplatin 0.001 mg/ml
-0.1
+0.2
-0.1
+0.5
-0.8
stress
3-octanone 0.456 mM
-0.3
-0.2
-0.2
-0.3
+0.6
nitrogen source
L-Glutamine (N)
-0.1
+0.3
+0.3
-1.1
+0.3
volatiles
R2A-HEPES with volatiles from Trichoderma atroviridae IMI
-0.0
-0.3
+0.1
-0.6
+0.5
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-0.1
+0.6
+0.0
-0.5
-0.1
nitrogen source
L-Arginine (N)
+0.2
+0.1
-0.3
+0.5
-0.5
pH
LB, pH6
-0.2
+0.0
-0.2
+0.8
+0.1
stress
6-Pentyl-2H-pyran-2-one 0.4177863333 mM
+0.1
-0.4
+0.1
+0.3
+0.3
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