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Cofit
Protein
Homologs
Fitness for 5 genes in
Sinorhizobium meliloti 1021
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
SMa1832 and SMa1833 are separated by 42 nucleotides
SMa1833 and SMa1835 are separated by 189 nucleotides
SMa1835 and SMa1836 are separated by 310 nucleotides
SMa1836 and SMa1838 are separated by 11 nucleotides
SMa1832: SMa1832 - hypothetical protein, at 1,039,013 to 1,039,465
SMa1832
SMa1833: SMa1833 - hypothetical protein, at 1,039,508 to 1,040,893
SMa1833
SMa1835: SMa1835 - hypothetical protein, at 1,041,083 to 1,041,991
SMa1835
SMa1836: SMa1836 - acetylornithine deacetylase, at 1,042,302 to 1,043,426
SMa1836
SMa1838: SMa1838 - dehydrogenase, at 1,043,438 to 1,044,361
SMa1838
Group
Condition
SMa1832
SMa1833
SMa1835
SMa1836
SMa1838
stress
6-Pentyl-2H-pyran-2-one 0.4557668333 mM
-0.2
-0.4
-0.3
-0.1
-0.9
dmso control
DMSO control
-0.5
-0.1
-0.3
-0.1
-0.8
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant
-1.3
+0.2
-0.3
-0.3
-0.1
stress
6-Pentyl-2H-pyran-2-one 0.4557668333 mM
-0.6
-0.2
-0.3
-0.1
-0.4
stress
6-Pentyl-2H-pyran-2-one 0.385649 mM
-0.5
-0.3
-0.1
-0.0
-0.5
stress
Aluminum chloride
-0.0
+0.1
-0.2
-0.0
-1.1
dmso control
DMSO control
-0.2
+0.0
-0.5
-0.0
-0.6
stress
3-octanone 0.456 mM
-0.2
-0.3
-0.2
-0.2
-0.3
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.5
+0.2
-0.0
-0.2
-0.6
stress
6-Pentyl-2H-pyran-2-one 0.4177863333 mM
+0.2
-0.2
-0.3
-0.0
-0.7
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+0.1
+0.4
+0.1
+0.3
-1.9
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.3
+0.0
+0.4
-0.3
-0.7
lb
LB
+0.2
-0.0
-0.2
-0.0
-0.8
stress
copper (II) chloride 1 mM
-0.1
+0.1
+0.2
-0.1
-1.1
stress
Paraquat dichloride 0.2 mg/ml
-0.5
-0.2
+0.3
+0.0
-0.4
stress
Chlorite 0.1 mM
-0.7
+0.2
-0.1
-0.2
+0.0
stress
6-Pentyl-2H-pyran-2-one 0.385649 mM
-0.2
-0.2
-0.5
-0.1
+0.3
nitrogen source
L-Asparagine (N)
+0.4
-0.0
+0.3
-0.4
-1.0
stress
3-octanone 0.456 mM
+0.2
+0.1
+0.0
+0.1
-1.0
stress
perchlorate 10 mM
+0.9
-0.0
+0.7
-0.3
-1.7
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
+0.1
+0.1
+0.3
+0.1
-1.1
nitrogen source
L-Glutamine (N)
+0.4
-0.1
+0.3
+0.3
-1.1
nitrogen source
L-Leucine (N)
+1.0
+0.2
-0.2
-0.1
-0.7
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
+0.2
-0.1
+0.6
+0.0
-0.5
stress
6-Pentyl-2H-pyran-2-one 0.4177863333 mM
+0.3
+0.1
-0.4
+0.1
+0.3
stress
Thallium(I) acetate 0.001 mg/ml
-0.5
+0.2
+0.1
+0.1
+0.5
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
+0.5
+0.3
+0.2
-0.0
-0.5
pH
LB, pH6
+0.2
-0.2
+0.0
-0.2
+0.8
stress
nitrate 40 mM
-0.3
+0.3
+0.1
+0.0
+0.6
in planta
Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish)
+0.6
+0.2
+0.4
-0.0
+0.3
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