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Cofit
Protein
Homologs
Fitness for 5 genes in
Sinorhizobium meliloti 1021
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
SMa1831 and SMa1832 are separated by 63 nucleotides
SMa1832 and SMa1833 are separated by 42 nucleotides
SMa1833 and SMa1835 are separated by 189 nucleotides
SMa1835 and SMa1836 are separated by 310 nucleotides
SMa1831: SMa1831 - hypothetical protein, at 1,038,347 to 1,038,949
SMa1831
SMa1832: SMa1832 - hypothetical protein, at 1,039,013 to 1,039,465
SMa1832
SMa1833: SMa1833 - hypothetical protein, at 1,039,508 to 1,040,893
SMa1833
SMa1835: SMa1835 - hypothetical protein, at 1,041,083 to 1,041,991
SMa1835
SMa1836: SMa1836 - acetylornithine deacetylase, at 1,042,302 to 1,043,426
SMa1836
Group
Condition
SMa1831
SMa1832
SMa1833
SMa1835
SMa1836
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant
-1.0
-1.3
+0.2
-0.3
-0.3
stress
6-Pentyl-2H-pyran-2-one 0.4557668333 mM
-0.4
-0.6
-0.2
-0.3
-0.1
stress
6-Pentyl-2H-pyran-2-one 0.4557668333 mM
-0.5
-0.2
-0.4
-0.3
-0.1
stress
6-Pentyl-2H-pyran-2-one 0.385649 mM
-0.4
-0.2
-0.2
-0.5
-0.1
stress
3-octanone 2.655166667 mM
-0.6
-0.2
-0.2
-0.4
-0.0
nitrogen source
L-Histidine (N)
-0.7
-0.2
+0.0
-0.5
+0.1
stress
3-octanone 0.456 mM
-0.4
-0.2
-0.3
-0.2
-0.2
stress
6-Pentyl-2H-pyran-2-one 0.4557668333 mM
-0.5
-0.3
+0.0
-0.3
-0.2
dmso control
DMSO control
-0.1
-0.5
-0.1
-0.3
-0.1
stress
6-Pentyl-2H-pyran-2-one 0.385649 mM
-0.3
-0.5
-0.3
-0.1
-0.0
stress
1-octen-3-ol 0.5427293333 mM
-0.8
-0.0
-0.1
-0.1
-0.0
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.4
-0.5
+0.2
-0.0
-0.2
stress
1-octen-3-ol 0.6030326667 mM
-0.5
+0.3
-0.3
-0.2
+0.0
stress
6-Pentyl-2H-pyran-2-one 0.4177863333 mM
-0.6
+0.3
+0.1
-0.4
+0.1
stress
Thallium(I) acetate 0.001 mg/ml
-0.5
-0.5
+0.2
+0.1
+0.1
nitrogen source
L-Arginine (N)
-0.5
+0.1
+0.2
+0.1
-0.3
stress
Cisplatin 0.001 mg/ml
-0.5
+0.1
-0.1
+0.2
-0.1
stress
Chlorite 0.1 mM
+0.5
-0.7
+0.2
-0.1
-0.2
nutrient
Min media with glucose
-0.6
+0.4
+0.1
-0.0
-0.1
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+0.1
-0.3
+0.0
+0.4
-0.3
nitrogen source
L-Asparagine (N)
-0.3
+0.4
-0.0
+0.3
-0.4
nitrogen source
Cytosine (N)
+0.7
-0.2
-0.3
-0.2
+0.2
in planta
Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish)
-0.3
+0.8
-0.0
+0.0
-0.1
in planta
Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish)
-0.6
+0.6
+0.2
+0.4
-0.0
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+0.2
+0.2
+0.2
+0.5
-0.2
nitrogen source
NAG (N)
+0.3
+0.5
+0.1
-0.0
+0.2
nitrogen source
L-Leucine (N)
+0.4
+1.0
+0.2
-0.2
-0.1
nitrogen source
L-Glutamine (N)
+0.3
+0.4
-0.1
+0.3
+0.3
stress
perchlorate 10 mM
+0.2
+0.9
-0.0
+0.7
-0.3
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
+0.6
+0.5
+0.3
+0.2
-0.0
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