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Protein
Homologs
Fitness for 5 genes in
Sinorhizobium meliloti 1021
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
SMa1820 and SMa1821 are separated by 67 nucleotides
SMa1821 and SMa1822 are separated by 225 nucleotides
SMa1822 and SMa1823 are separated by 215 nucleotides
SMa1823 and SMa1825 are separated by 144 nucleotides
SMa1820: SMa1820 - hypothetical protein, at 1,032,026 to 1,032,334
SMa1820
SMa1821: SMa1821 - hydrolase, at 1,032,402 to 1,033,052
SMa1821
SMa1822: SMa1822 - hypothetical protein, at 1,033,278 to 1,034,189
SMa1822
SMa1823: SMa1823 - Transcriptional regulator, at 1,034,405 to 1,035,313
SMa1823
SMa1825: SMa1825 - Transcriptional regulator, at 1,035,458 to 1,036,366
SMa1825
Group
Condition
SMa1820
SMa1821
SMa1822
SMa1823
SMa1825
stress
perchlorate 10 mM
-0.6
-0.2
-1.1
-0.2
+0.0
nitrogen source
L-Histidine (N)
-0.5
+0.0
-0.7
-0.2
-0.1
stress
copper (II) chloride 1 mM
-0.1
-0.0
-1.2
+0.1
-0.4
nitrogen source
L-Arginine (N)
+0.2
-0.4
-1.0
-0.0
-0.3
stress
Polymyxin B sulfate 0.00005 mg/ml
-0.6
-0.5
-0.5
+0.1
+0.1
stress
6-Pentyl-2H-pyran-2-one 0.4557668333 mM
-0.0
+0.0
-1.1
-0.0
-0.1
stress
Nickel (II) chloride 1 mM
-0.3
-0.0
-0.7
+0.1
-0.3
volatiles
R2A-HEPES with volatiles from Trichoderma atroviridae IMI
-0.2
-0.0
-0.4
-0.3
-0.2
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.6
+0.0
+0.2
-0.4
-0.3
nitrogen source
Cytosine (N)
-0.2
-0.0
-1.0
+0.2
+0.0
r2a control
R2A control for volatile experiments
+0.1
+0.1
-0.3
-0.2
-0.5
pH
LB, pH6
-0.2
-0.2
-0.7
+0.2
+0.2
r2a control
R2A control for volatile experiments
-0.2
+0.2
-0.1
-0.4
-0.2
carbon source
methyl 3-keto-a-D-glucopyranoside (C)
-0.2
+0.4
-0.3
+0.1
-0.5
nitrogen source
NAG (N)
+0.2
-0.3
+0.1
-0.4
-0.2
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant
+0.3
-0.3
-0.3
+0.1
-0.3
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.3
-0.3
+0.5
+0.1
-0.4
temperature
LB, 23C
-0.4
-0.3
+0.3
+0.2
+0.0
nitrogen source
L-Leucine (N)
+0.1
-0.5
+0.0
-0.2
+0.4
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+0.3
-0.2
+0.6
+0.1
-0.7
nitrogen source
L-Asparagine (N)
+0.3
+0.2
-0.3
+0.2
-0.1
stress
3-octanone 0.456 mM
-0.5
+0.2
+0.3
+0.1
+0.2
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.2
+0.1
+0.5
+0.2
-0.2
carbon source
Myristic (C)
-0.4
+0.1
+0.7
+0.1
-0.0
r2a control
R2A control for volatile experiments
-0.1
+0.4
+0.4
-0.2
-0.2
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
+0.4
+0.0
+0.8
-0.2
-0.6
lb no stress control
LB no stress control
+0.2
+0.1
+0.5
-0.1
-0.3
stress
nitrate 40 mM
+0.3
-0.0
+0.6
-0.2
-0.1
carbon source
L-Arabinose (C)
+0.1
-0.3
+0.8
+0.1
+0.1
nitrogen source
Gly-DL-Asp (N)
+0.4
-0.1
+0.6
-0.2
+0.0
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