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Cofit
Protein
Homologs
Fitness for 5 genes in
Sinorhizobium meliloti 1021
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
SMa1760 and SMa1761 are separated by 2 nucleotides
SMa1761 and SMa1765 are separated by 378 nucleotides
SMa1765 and SMa1766 are separated by 27 nucleotides
SMa1766 and SMa1767 are separated by 786 nucleotides
SMa1760: SMa1760 - phosphotransferase, at 1,000,541 to 1,001,788
SMa1760
SMa1761: SMa1761 - aminotransferase, at 1,001,791 to 1,003,107
SMa1761
SMa1765: SMa1765 - hypothetical protein, at 1,003,486 to 1,003,971
SMa1765
SMa1766: SMa1766 - hypothetical protein, at 1,003,999 to 1,004,250
SMa1766
SMa1767: SMa1767 - hypothetical protein, at 1,005,037 to 1,005,204
SMa1767
Group
Condition
SMa1760
SMa1761
SMa1765
SMa1766
SMa1767
carbon source
L-Alanine (C)
-0.3
-0.1
-2.6
+0.1
N.D.
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+0.2
-0.1
-3.1
-0.1
N.D.
carbon source
acetate (C)
-0.2
+0.0
-2.3
+0.0
N.D.
carbon source
Xylobiose (C)
+0.0
-0.3
-1.9
-0.1
N.D.
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant
-0.4
+0.0
-1.4
-0.3
N.D.
carbon source
Lactitol (C)
-0.4
+0.1
-1.5
-0.3
N.D.
stress
1-octen-3-ol 0.6030326667 mM
-0.2
-0.1
-1.5
-0.1
N.D.
stress
Aluminum chloride
-0.1
+0.1
-2.0
+0.2
N.D.
stress
Nickel (II) chloride 1 mM
-0.5
-0.5
-0.5
-0.3
N.D.
carbon source
D-Cellobiose (C)
-0.2
-0.1
-1.2
-0.1
N.D.
lb
LB
-0.0
-0.0
-1.7
+0.2
N.D.
carbon source
Myristic (C)
-0.1
-0.3
-1.4
+0.2
N.D.
carbon source
D-Mannose (C)
-0.2
+0.1
-1.4
+0.0
N.D.
stress
Cisplatin 0.0005 mg/ml
-0.3
-0.2
-0.9
+0.0
N.D.
carbon source
Beta-Lactose (C)
-0.1
+0.1
-1.1
-0.2
N.D.
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
+0.2
-0.2
-0.7
-0.3
N.D.
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
+0.0
+0.3
-1.2
-0.0
N.D.
r2a control
R2A control for volatile experiments
+0.4
+0.0
-1.1
-0.0
N.D.
stress
copper (II) chloride 1 mM
+0.4
-0.4
-0.7
+0.3
N.D.
nutrient
Min media with glucose
-0.3
+0.1
+1.0
-0.2
N.D.
nitrogen source
L-Arginine (N)
+0.4
-0.2
+0.9
-0.1
N.D.
stress
Chlorite 0.1 mM
+0.2
+0.2
+0.9
-0.2
N.D.
volatiles
R2A-HEPES with volatiles from Trichoderma atroviridae IMI
+0.3
+0.0
+1.0
-0.2
N.D.
nitrogen source
L-Asparagine (N)
+0.1
+0.3
+1.0
-0.1
N.D.
nitrogen source
Cytosine (N)
-0.1
+0.3
+1.1
+0.1
N.D.
volatiles
R2A-HEPES with volatiles from Trichoderma atroviridae IMI
+0.2
-0.1
+1.1
+0.4
N.D.
volatiles
R2A-HEPES with volatiles from Trichoderma atroviridae IMI
+0.4
-0.1
+1.2
+0.3
N.D.
nitrogen source
D-Glucosamine Hydrochloride (N)
-0.1
+0.3
+1.5
+0.1
N.D.
nitrogen source
Gelatin (N)
-0.3
+0.2
+2.2
-0.2
N.D.
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-0.0
+0.3
+1.7
+0.2
N.D.
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